Variant report

Variant	rs146554892
Chromosome Location	chr5:114260860-114260861
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:43 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882729	chr5:113743628-114497708	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv1020798	chr5:113821828-114392727	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv537867	chr5:113821828-114392727	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	esv1813417	chr5:114218797-114261056	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
5	nsv4963	chr5:114234431-114288397	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv1812138	chr5:114241746-114261056	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
7	esv1813406	chr5:114241746-114261056	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
8	nsv511293	chr5:114248387-114279914	Enhancers ZNF genes & repeats Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3528723	chr5:114253753-114262701	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv3528724	chr5:114253803-114262501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv3528725	chr5:114253803-114262501	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3471083	chr5:114254153-114261851	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
13	esv3471084	chr5:114254153-114261851	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
14	nsv513256	chr5:114254291-114262256	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
15	nsv436491	chr5:114254698-114262701	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
16	nsv499738	chr5:114254932-114261431	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
17	esv21161	chr5:114255282-114261315	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
18	esv20661	chr5:114255699-114262577	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
19	esv1792515	chr5:114255927-114261056	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
20	esv1808824	chr5:114255927-114261056	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
21	esv1814514	chr5:114255927-114261056	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
22	nsv599449	chr5:114255927-114261056	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
23	esv1808445	chr5:114255927-114327073	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
24	esv1807872	chr5:114256310-114261056	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
25	nsv599454	chr5:114256310-114261056	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
26	esv1794869	chr5:114256573-114261056	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
27	esv1797128	chr5:114256573-114261056	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
28	esv1803761	chr5:114256573-114261056	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
29	esv1806679	chr5:114256573-114261056	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
30	esv1811794	chr5:114256573-114261056	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
31	esv1813104	chr5:114256573-114261056	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
32	nsv599458	chr5:114256573-114261056	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
33	esv1792310	chr5:114256573-114279914	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
34	esv1800292	chr5:114256573-114279914	Enhancers ZNF genes & repeats Weak transcription	n/a	n/a	inside rSNPs	diseases
35	esv1801111	chr5:114256573-114279914	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
36	esv1805573	chr5:114256573-114283042	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
37	esv1806485	chr5:114256573-114283042	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
38	esv1811549	chr5:114256573-114283042	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
39	esv1814905	chr5:114257642-114261056	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
40	nsv599465	chr5:114257642-114261056	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
41	nsv599467	chr5:114258515-114261056	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
42	esv3404696	chr5:114258753-114263351	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
43	esv2438587	chr5:114260560-114262077	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:114260600-114261000	Enhancers	Fetal Brain Male	brain
2	chr5:114260800-114264400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links