The 2.0 version of rSNPBase

Variant report

Variant rs146704009
Chromosome Location chr1:63057730-63057731
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62939800-63060200 Weak transcription Small Intestine intestine
2 chr1:62958200-63061000 Weak transcription Lung lung
3 chr1:63007200-63096200 Weak transcription HUVEC blood vessel
4 chr1:63010800-63078400 Weak transcription A549 lung
5 chr1:63021600-63058800 Weak transcription Stomach Smooth Muscle stomach
6 chr1:63021600-63061400 Weak transcription Pancreas Pancrea
7 chr1:63036800-63058600 Weak transcription Fetal Brain Female brain
8 chr1:63036800-63113600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:63038400-63087600 Weak transcription NHEK skin
10 chr1:63038400-63095600 Weak transcription Brain Germinal Matrix brain
11 chr1:63038600-63083000 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr1:63039000-63063400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:63039200-63095200 Weak transcription Ovary ovary
14 chr1:63041000-63095200 Weak transcription Fetal Muscle Leg muscle
15 chr1:63041000-63095600 Weak transcription Fetal Stomach stomach
16 chr1:63041400-63059000 Weak transcription Aorta Aorta
17 chr1:63042200-63083600 Weak transcription Fetal Muscle Trunk muscle
18 chr1:63044000-63076000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:63047600-63077000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:63050600-63083800 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr1:63051000-63066400 Weak transcription NHLF lung
22 chr1:63051400-63059400 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr1:63051400-63062800 Weak transcription Psoas Muscle Psoas
24 chr1:63051800-63075800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr1:63051800-63077000 Weak transcription Primary hematopoietic stem cells blood
26 chr1:63051800-63083400 Weak transcription Fetal Lung lung
27 chr1:63051800-63096000 Weak transcription Left Ventricle heart
28 chr1:63052000-63062200 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr1:63052400-63062400 Weak transcription Fetal Intestine Small intestine
30 chr1:63052400-63083800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:63052600-63058200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr1:63052600-63059400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:63052600-63077200 Weak transcription HSMM muscle
34 chr1:63052600-63084400 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr1:63052800-63059600 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr1:63052800-63062400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:63052800-63067000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr1:63053000-63068000 Weak transcription NHDF-Ad bronchial
39 chr1:63053600-63057800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:63054600-63064800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:63054800-63079800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:63054800-63087600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:63055200-63063000 Weak transcription NH-A brain
44 chr1:63055400-63059400 Weak transcription Muscle Satellite Cultured Cells --
45 chr1:63055800-63059400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:63056000-63061400 Weak transcription Fetal Intestine Large intestine
47 chr1:63056400-63059200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:63056400-63059400 Weak transcription Osteobl bone
49 chr1:63056600-63059000 Weak transcription Liver Liver
50 chr1:63056600-63061200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015