Variant report

Variant	rs147102939
Chromosome Location	chr13:49373545-49373546
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049117	chr13:49089476-49928945	Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
2	esv2758327	chr13:49283983-49472517	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2759936	chr13:49283983-49472517	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv832606	chr13:49352212-49506009	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv3409395	chr13:49372601-49374599	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv2638541	chr13:49372767-49374424	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv2241070	chr13:49373033-49373745	Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3495425	chr13:49373112-49373641	Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3510419	chr13:49373114-49373643	Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3510430	chr13:49373143-49373622	Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3495426	chr13:49373146-49373658	Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3495424	chr13:49373148-49373586	Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv3510408	chr13:49373152-49373623	Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3495428	chr13:49373159-49373599	Weak transcription	n/a	n/a	inside rSNPs	diseases
15	esv3510441	chr13:49373167-49373577	Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv3510452	chr13:49373205-49373554	Weak transcription	n/a	n/a	inside rSNPs	diseases
17	esv3495427	chr13:49373215-49373565	Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv3495429	chr13:49373219-49373563	Weak transcription	n/a	n/a	inside rSNPs	diseases
19	esv3510463	chr13:49373219-49373563	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:49366800-49374800	Weak transcription	NHDF-Ad	bronchial
2	chr13:49366800-49383000	Weak transcription	Osteobl	bone
3	chr13:49371400-49374800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr13:49371800-49375600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr13:49372000-49375000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr13:49372000-49375400	Weak transcription	Muscle Satellite Cultured Cells	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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