The 2.0 version of rSNPBase

Variant report

Variant rs147153502
Chromosome Location chr3:105551309-105551310
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105483200-105555200 Weak transcription Placenta Placenta
2 chr3:105511400-105566400 Weak transcription Aorta Aorta
3 chr3:105528400-105553600 Weak transcription Fetal Kidney kidney
4 chr3:105532200-105563000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr3:105533600-105560600 Weak transcription Primary hematopoietic stem cells short term culture blood
6 chr3:105533800-105570000 Weak transcription Dnd41 blood
7 chr3:105534200-105566200 Weak transcription Brain Germinal Matrix brain
8 chr3:105535600-105553800 Weak transcription Fetal Brain Male brain
9 chr3:105539400-105551600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr3:105540800-105569600 Weak transcription Fetal Thymus thymus
11 chr3:105541000-105554400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr3:105541800-105553600 Weak transcription Fetal Brain Female brain
13 chr3:105542200-105553600 Weak transcription Liver Liver
14 chr3:105542200-105554000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr3:105542600-105555400 Weak transcription Brain Angular Gyrus brain
16 chr3:105542600-105566000 Weak transcription Fetal Stomach stomach
17 chr3:105542800-105554400 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr3:105543000-105555600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr3:105543200-105551600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr3:105543400-105555800 Weak transcription HepG2 liver
21 chr3:105543400-105560800 Weak transcription Fetal Muscle Trunk muscle
22 chr3:105543400-105581200 Weak transcription Gastric stomach
23 chr3:105543600-105557200 Weak transcription Fetal Intestine Large intestine
24 chr3:105543800-105551400 Weak transcription HSMMtube muscle
25 chr3:105543800-105571000 Weak transcription Lung lung
26 chr3:105544000-105554400 Weak transcription Fetal Lung lung
27 chr3:105544200-105554400 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr3:105544200-105559200 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr3:105544200-105584600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr3:105545400-105553000 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr3:105545800-105551800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
32 chr3:105546000-105552400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr3:105546200-105552200 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr3:105546400-105552200 Enhancers Primary T helper cells fromperipheralblood blood
35 chr3:105546600-105586200 Weak transcription Esophagus oesophagus
36 chr3:105546800-105553800 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr3:105546800-105560800 Weak transcription Fetal Muscle Leg muscle
38 chr3:105547200-105551400 Weak transcription Fetal Heart heart
39 chr3:105547200-105551600 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr3:105547200-105553600 Weak transcription Hela-S3 cervix
41 chr3:105547200-105554600 Weak transcription Duodenum Mucosa Duodenum
42 chr3:105547200-105554800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr3:105547200-105554800 Weak transcription Ovary ovary
44 chr3:105547200-105555000 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr3:105547200-105557400 Weak transcription Fetal Intestine Small intestine
46 chr3:105547400-105554400 Weak transcription NH-A brain
47 chr3:105547400-105557200 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr3:105547800-105554600 Weak transcription HMEC breast
49 chr3:105547800-105554800 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr3:105547800-105555400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015