The 2.0 version of rSNPBase

Variant report

Variant rs147181561
Chromosome Location chr3:179385465-179385466
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179372600-179403200 Weak transcription Primary B cells from cord blood blood
2 chr3:179372600-179408400 Weak transcription Fetal Intestine Small intestine
3 chr3:179372600-179425200 Weak transcription Primary hematopoietic stem cells blood
4 chr3:179374600-179408000 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr3:179375000-179389200 Weak transcription Hela-S3 cervix
6 chr3:179376600-179400800 Weak transcription Dnd41 blood
7 chr3:179380600-179418800 Weak transcription Primary T cells fromperipheralblood blood
8 chr3:179382200-179385800 Enhancers Fetal Muscle Leg muscle
9 chr3:179383400-179386600 Enhancers Left Ventricle heart
10 chr3:179383800-179385600 Enhancers Fetal Brain Female brain
11 chr3:179383800-179385600 Enhancers Right Ventricle heart
12 chr3:179384200-179386000 Weak transcription HepG2 liver
13 chr3:179384400-179387800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr3:179384400-179390600 Weak transcription H9 Cell Line embryonic stem cell
15 chr3:179384400-179410400 Weak transcription Rectal Smooth Muscle rectum
16 chr3:179384600-179387800 Weak transcription Lung lung
17 chr3:179384600-179388800 Weak transcription HUVEC blood vessel
18 chr3:179384600-179389000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr3:179384600-179390600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr3:179384600-179397600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr3:179384800-179386000 Enhancers Brain Germinal Matrix brain
22 chr3:179384800-179387600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr3:179384800-179387600 Weak transcription Psoas Muscle Psoas
24 chr3:179384800-179387600 Weak transcription NHLF lung
25 chr3:179384800-179387800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr3:179384800-179389600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr3:179384800-179389600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr3:179384800-179389600 Weak transcription Fetal Lung lung
29 chr3:179384800-179389800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr3:179384800-179390200 Weak transcription Fetal Muscle Trunk muscle
31 chr3:179384800-179390600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr3:179384800-179402200 Weak transcription Fetal Stomach stomach
33 chr3:179384800-179406200 Weak transcription HSMM muscle
34 chr3:179384800-179408000 Weak transcription Fetal Thymus thymus
35 chr3:179384800-179415200 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr3:179384800-179425000 Weak transcription Brain Anterior Caudate brain
37 chr3:179384800-179428400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr3:179384800-179443800 Weak transcription Esophagus oesophagus
39 chr3:179385000-179387800 Weak transcription Adipose Nuclei Adipose
40 chr3:179385000-179387800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr3:179385000-179387800 Weak transcription Stomach Smooth Muscle stomach
42 chr3:179385000-179388400 Enhancers Skeletal Muscle Female skeletal muscle
43 chr3:179385000-179389200 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr3:179385000-179389400 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr3:179385000-179389400 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr3:179385000-179389600 Weak transcription H1 Cell Line embryonic stem cell
47 chr3:179385000-179389600 Weak transcription Fetal Kidney kidney
48 chr3:179385000-179391600 Enhancers Skeletal Muscle Male skeletal muscle
49 chr3:179385000-179398800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr3:179385000-179415600 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015