Variant report

Variant	rs147254926
Chromosome Location	chr5:92847749-92847750
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022355	chr5:92846496-92911797	Weak transcription Enhancers Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	n/a
2	nsv537807	chr5:92846496-92911797	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:92815200-92859200	Weak transcription	Fetal Brain Male	brain
2	chr5:92827000-92858200	Weak transcription	Ovary	ovary
3	chr5:92827200-92851600	Weak transcription	Fetal Kidney	kidney
4	chr5:92827200-92858200	Weak transcription	Fetal Stomach	stomach
5	chr5:92839600-92857000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr5:92839800-92855200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr5:92840200-92848200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr5:92840200-92848400	Weak transcription	HSMM	muscle
9	chr5:92840400-92848000	Weak transcription	Osteobl	bone
10	chr5:92841400-92857400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr5:92841600-92847800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr5:92841600-92858200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr5:92842200-92853000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr5:92845800-92850600	Enhancers	Muscle Satellite Cultured Cells	--
15	chr5:92846000-92849200	Enhancers	HUVEC	blood vessel
16	chr5:92847000-92848400	Weak transcription	NHLF	lung
17	chr5:92847200-92848200	Weak transcription	NH-A	brain
18	chr5:92847200-92848200	Weak transcription	NHDF-Ad	bronchial
19	chr5:92847200-92857200	Weak transcription	Fetal Lung	lung
20	chr5:92847400-92850200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr5:92847600-92854200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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