Variant report

Variant	rs147320417
Chromosome Location	chr1:71132992-71132993
allele	-/TTAC
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv871024	chr1:71088106-71169865	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3420862	chr1:71132408-71133777	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71132000-71134600	Enhancers	Fetal Heart	heart
2	chr1:71132200-71133000	Enhancers	Aorta	Aorta
3	chr1:71132200-71133000	Enhancers	Pancreas	Pancrea
4	chr1:71132200-71133800	Enhancers	Rectal Smooth Muscle	rectum
5	chr1:71132400-71133200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr1:71132400-71137600	Weak transcription	Fetal Lung	lung
7	chr1:71132600-71133400	Enhancers	K562	blood
8	chr1:71132800-71133800	Weak transcription	Left Ventricle	heart
9	chr1:71132800-71133800	Weak transcription	Right Atrium	heart
10	chr1:71132800-71136800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr1:71132800-71141000	Weak transcription	Gastric	stomach

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links