The 2.0 version of rSNPBase

Variant report

Variant rs147553569
Chromosome Location chr10:49670227-49670228
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:49652000-49673000 Weak transcription HMEC breast
2 chr10:49653000-49673600 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr10:49655200-49677800 Weak transcription H9 Cell Line embryonic stem cell
4 chr10:49657800-49677600 Weak transcription HSMMtube muscle
5 chr10:49662200-49671800 Weak transcription Aorta Aorta
6 chr10:49662400-49672400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr10:49662600-49671800 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr10:49664800-49671200 Weak transcription Right Ventricle heart
9 chr10:49664800-49671400 Weak transcription Adipose Nuclei Adipose
10 chr10:49664800-49671400 Weak transcription NHDF-Ad bronchial
11 chr10:49665200-49671600 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr10:49665200-49673400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr10:49665400-49670800 Weak transcription Ovary ovary
14 chr10:49665400-49671200 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr10:49665400-49671200 Weak transcription Brain Angular Gyrus brain
16 chr10:49665400-49672200 Weak transcription Spleen Spleen
17 chr10:49665400-49675000 Weak transcription HUVEC blood vessel
18 chr10:49665800-49671200 Weak transcription Brain Hippocampus Middle brain
19 chr10:49665800-49671200 Weak transcription Fetal Heart heart
20 chr10:49665800-49671400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr10:49665800-49671400 Weak transcription Brain Inferior Temporal Lobe brain
22 chr10:49665800-49671600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr10:49665800-49672400 Weak transcription Brain Substantia Nigra brain
24 chr10:49666400-49671400 Weak transcription Brain Cingulate Gyrus brain
25 chr10:49666600-49671400 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr10:49667200-49671000 Weak transcription Fetal Stomach stomach
27 chr10:49667600-49670800 Strong transcription HSMM muscle
28 chr10:49668200-49670600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr10:49668200-49670800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr10:49668200-49671400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr10:49668200-49671400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr10:49668200-49674400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr10:49668400-49671000 Weak transcription Primary hematopoietic stem cells blood
34 chr10:49668400-49671800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr10:49668400-49676200 Weak transcription NHLF lung
36 chr10:49668600-49670800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr10:49668800-49673200 Weak transcription Muscle Satellite Cultured Cells --
38 chr10:49668800-49674200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr10:49669000-49674000 Enhancers K562 blood
40 chr10:49669200-49672000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr10:49669200-49674800 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
42 chr10:49669800-49672000 Genic enhancers Primary hematopoietic stem cells short term culture blood
43 chr10:49670200-49675200 Weak transcription Osteobl bone

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Last update: Aug 31, 2015