Variant report
| Variant | rs147623651 |
|---|---|
| Chromosome Location | chr12:119329270-119329271 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
(count:1 , 50 per page) page:
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| No. | lncRNA name | Chromosome Location | lncRNA alias |
|---|---|---|---|
| 1 | lnc-TAOK3-6 | chr12:119329194-119329286 | ENSG00000256149 |
| No data |
| No data |
| No data |
Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv930978 | chr12:118866332-119450600 | Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 15 gene(s) | inside rSNPs | diseases |
| 2 | esv17471 | chr12:119328798-119329610 | Inactive region | lncRNA | n/a | inside rSNPs | n/a |
| 3 | esv20139 | chr12:119328798-119332851 | Inactive region | lncRNA | n/a | inside rSNPs | diseases |
| 4 | nsv560392 | chr12:119328906-119329541 | Inactive region | lncRNA | n/a | inside rSNPs | n/a |
| 5 | nsv560393 | chr12:119328906-119332931 | Inactive region | lncRNA | n/a | inside rSNPs | diseases |
| 6 | nsv560394 | chr12:119328906-119334779 | Inactive region | lncRNA | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
