| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
esv3328565 |
chr3:27991169-28915035 |
Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
28 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv916364 |
chr3:28468275-29146280 |
Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv876651 |
chr3:28774258-28823156 |
Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
n/a
|
| 4 |
nsv590011 |
chr3:28780713-29044437 |
Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
nsv590012 |
chr3:28808844-28817784 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 6 |
nsv965406 |
chr3:28808867-28817686 |
Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 7 |
esv16162 |
chr3:28810031-28817818 |
Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 8 |
nsv441815 |
chr3:28810437-28816108 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 9 |
esv2763773 |
chr3:28810441-28816843 |
Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 10 |
esv3495266 |
chr3:28811117-28815170 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 11 |
esv3495267 |
chr3:28811117-28815170 |
ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 12 |
nsv516014 |
chr3:28811329-28814917 |
ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 13 |
nsv590013 |
chr3:28811329-28816082 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 14 |
nsv590014 |
chr3:28811329-28816882 |
ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 15 |
nsv590015 |
chr3:28811329-28817281 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 16 |
nsv590016 |
chr3:28811329-28817784 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 17 |
nsv590017 |
chr3:28811329-28819123 |
Enhancers Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 18 |
nsv876652 |
chr3:28811329-28947691 |
Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 19 |
nsv590018 |
chr3:28812010-28816082 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 20 |
nsv590019 |
chr3:28812010-28817281 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 21 |
nsv590020 |
chr3:28812010-28817784 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page:
1
