Variant report

Variant	rs147927366
Chromosome Location	chr15:34199609-34199610
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043046	chr15:33714908-34321330	Enhancers Flanking Active TSS Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv456789	chr15:34034421-34426618	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
3	nsv568920	chr15:34034421-34426618	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
4	nsv471235	chr15:34035529-34421951	Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
5	nsv568921	chr15:34046635-34247622	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
6	nsv1044844	chr15:34065524-34296829	Enhancers Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
7	nsv903984	chr15:34174066-34238804	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	esv3311096	chr15:34198460-34202658	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34191000-34202800	Weak transcription	NHLF	lung
2	chr15:34191400-34201000	Weak transcription	Pancreas	Pancrea
3	chr15:34195000-34200200	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr15:34195000-34203400	Weak transcription	Aorta	Aorta
5	chr15:34195800-34202800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr15:34199200-34199800	Enhancers	Fetal Heart	heart
7	chr15:34199200-34200000	Enhancers	HUVEC	blood vessel
8	chr15:34199200-34200200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr15:34199200-34200800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr15:34199200-34201400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr15:34199200-34201800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr15:34199200-34202000	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr15:34199400-34199800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr15:34199400-34199800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr15:34199400-34199800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr15:34199400-34199800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
17	chr15:34199400-34199800	Enhancers	Adipose Nuclei	Adipose
18	chr15:34199400-34199800	Enhancers	Brain Cingulate Gyrus	brain
19	chr15:34199400-34199800	Enhancers	Brain Substantia Nigra	brain
20	chr15:34199400-34199800	Enhancers	Fetal Lung	lung
21	chr15:34199400-34199800	Enhancers	Right Ventricle	heart
22	chr15:34199400-34200000	Enhancers	H1 Cell Line	embryonic stem cell
23	chr15:34199400-34200000	Enhancers	Brain Hippocampus Middle	brain
24	chr15:34199400-34200000	Enhancers	Brain Inferior Temporal Lobe	brain
25	chr15:34199400-34200000	Enhancers	NHDF-Ad	bronchial
26	chr15:34199400-34200200	Enhancers	NH-A	brain
27	chr15:34199400-34201200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr15:34199400-34201400	Enhancers	Muscle Satellite Cultured Cells	--
29	chr15:34199400-34201600	Enhancers	HUES6 Cell Line	embryonic stem cell
30	chr15:34199400-34201600	Enhancers	Osteobl	bone
31	chr15:34199600-34199800	Enhancers	ES-I3 Cell Line	embryonic stem cell
32	chr15:34199600-34199800	Enhancers	iPS-18 Cell Line	embryonic stem cell
33	chr15:34199600-34199800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr15:34199600-34199800	Enhancers	Hela-S3	cervix
35	chr15:34199600-34200000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr15:34199600-34201200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr15:34199600-34201600	Enhancers	HUES64 Cell Line	embryonic stem cell
38	chr15:34199600-34201600	Enhancers	iPS-20b Cell Line	embryonic stem cell
39	chr15:34199600-34220800	Weak transcription	Right Atrium	heart

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