Variant report

Variant	rs147989686
Chromosome Location	chr7:112578762-112578763
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531436	chr7:111856171-112585407	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
2	esv1794529	chr7:112400060-112588376	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	esv2754368	chr7:112483049-112588049	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv2758131	chr7:112492127-112768628	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	esv2759556	chr7:112492127-112768628	Active TSS Weak transcription Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
6	esv3692941	chr7:112571420-112614215	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
7	esv1795316	chr7:112577657-112588734	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
8	nsv1027981	chr7:112577657-112613212	Weak transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:112541400-112578800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr7:112551600-112579400	Weak transcription	Spleen	Spleen
3	chr7:112553800-112578800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr7:112571400-112578800	Weak transcription	Psoas Muscle	Psoas
5	chr7:112571600-112578800	Weak transcription	Small Intestine	intestine
6	chr7:112573200-112578800	Weak transcription	Primary T cells fromperipheralblood	blood
7	chr7:112573200-112578800	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr7:112575600-112579200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
9	chr7:112575800-112578800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
10	chr7:112576400-112578800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
11	chr7:112576600-112578800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr7:112576600-112578800	Weak transcription	Esophagus	oesophagus
13	chr7:112576600-112578800	Weak transcription	Gastric	stomach
14	chr7:112576800-112578800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr7:112576800-112578800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr7:112576800-112580800	Active TSS	Left Ventricle	heart
17	chr7:112577200-112579200	Flanking Active TSS	Dnd41	blood
18	chr7:112577400-112578800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr7:112577400-112579200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr7:112577400-112580800	Active TSS	Right Ventricle	heart
21	chr7:112577600-112578800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
22	chr7:112577600-112578800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
23	chr7:112577600-112579200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr7:112577600-112580200	Active TSS	Right Atrium	heart
25	chr7:112577600-112580600	Active TSS	Brain Angular Gyrus	brain
26	chr7:112577600-112580800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr7:112577600-112581000	Active TSS	Fetal Brain Female	brain
28	chr7:112577600-112581400	Active TSS	Aorta	Aorta
29	chr7:112577800-112580600	Active TSS	HSMMtube	muscle
30	chr7:112578000-112578800	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
31	chr7:112578000-112578800	Active TSS	Brain Cingulate Gyrus	brain
32	chr7:112578000-112579000	Flanking Active TSS	HMEC	breast
33	chr7:112578000-112579200	Flanking Active TSS	Primary T cells from cord blood	blood
34	chr7:112578000-112580600	Active TSS	Brain Anterior Caudate	brain
35	chr7:112578000-112580600	Active TSS	Brain Inferior Temporal Lobe	brain
36	chr7:112578000-112580800	Active TSS	NHLF	lung
37	chr7:112578000-112581000	Active TSS	Brain Germinal Matrix	brain
38	chr7:112578200-112578800	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
39	chr7:112578200-112578800	Enhancers	Liver	Liver
40	chr7:112578200-112578800	Flanking Active TSS	Fetal Lung	lung
41	chr7:112578200-112578800	Active TSS	Fetal Muscle Leg	muscle
42	chr7:112578200-112578800	Enhancers	Stomach Mucosa	stomach
43	chr7:112578200-112578800	Flanking Active TSS	NHDF-Ad	bronchial
44	chr7:112578200-112579000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
45	chr7:112578200-112579200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
46	chr7:112578200-112579200	Flanking Active TSS	Duodenum Mucosa	Duodenum
47	chr7:112578200-112579400	Flanking Active TSS	Primary hematopoietic stem cells	blood
48	chr7:112578200-112579400	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
49	chr7:112578200-112579400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
50	chr7:112578200-112580400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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