Variant report

Variant	rs148106532
Chromosome Location	chr13:95619358-95619359
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:95619254..95622585-chr13:95624903..95627476,4	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv274954	chr13:95617339-95621812	Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	esv3405940	chr13:95618976-95621724	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95616400-95619600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr13:95618000-95619400	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
3	chr13:95618000-95619400	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
4	chr13:95618400-95619400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr13:95618400-95619400	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr13:95618400-95619600	Enhancers	Brain Germinal Matrix	brain
7	chr13:95618400-95619600	Bivalent Enhancer	Brain Hippocampus Middle	brain
8	chr13:95618600-95619600	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr13:95618800-95619400	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
10	chr13:95618800-95619400	Enhancers	A549	lung
11	chr13:95618800-95619600	Enhancers	Brain Cingulate Gyrus	brain
12	chr13:95619000-95619400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr13:95619000-95619400	Flanking Bivalent TSS/Enh	Brain Anterior Caudate	brain
14	chr13:95619000-95619600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr13:95619000-95619600	Weak transcription	Pancreas	Pancrea
16	chr13:95619200-95619400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr13:95619200-95619400	Flanking Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr13:95619200-95619600	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
19	chr13:95619200-95619600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr13:95619200-95619600	Weak transcription	Brain Substantia Nigra	brain
21	chr13:95619200-95620200	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links