Variant report

Variant rs148288015
Chromosome Location chr6:30883061-30883062
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30881400-30883600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr6:30881400-30884200 Active TSS Esophagus oesophagus
3 chr6:30882200-30883200 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
4 chr6:30882200-30883200 Flanking Active TSS Muscle Satellite Cultured Cells --
5 chr6:30882200-30883200 Flanking Active TSS Adipose Nuclei Adipose
6 chr6:30882200-30883200 Flanking Active TSS Brain Germinal Matrix brain
7 chr6:30882200-30883200 Flanking Active TSS Duodenum Mucosa Duodenum
8 chr6:30882200-30883200 Flanking Active TSS Fetal Heart heart
9 chr6:30882200-30883200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
10 chr6:30882200-30883400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
11 chr6:30882200-30883400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
12 chr6:30882200-30883400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr6:30882200-30883400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
14 chr6:30882200-30883400 Flanking Active TSS Liver Liver
15 chr6:30882200-30883400 Flanking Active TSS Fetal Lung lung
16 chr6:30882200-30883400 Flanking Active TSS Hela-S3 cervix
17 chr6:30882200-30883600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
18 chr6:30882200-30883800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
19 chr6:30882200-30883800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
20 chr6:30882200-30883800 Flanking Active TSS Stomach Smooth Muscle stomach
21 chr6:30882200-30884000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
22 chr6:30882400-30883200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
23 chr6:30882400-30883200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
24 chr6:30882400-30883200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr6:30882400-30883200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr6:30882400-30883200 Flanking Active TSS Brain Inferior Temporal Lobe brain
27 chr6:30882400-30883200 Flanking Active TSS Fetal Brain Female brain
28 chr6:30882400-30883400 Flanking Active TSS Colon Smooth Muscle Colon
29 chr6:30882400-30883400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
30 chr6:30882400-30883400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
31 chr6:30882400-30883400 Transcr. at gene 5' and 3' K562 blood
32 chr6:30882400-30883600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr6:30882400-30883600 Flanking Active TSS Brain Hippocampus Middle brain
34 chr6:30882400-30883600 Flanking Active TSS Dnd41 blood
35 chr6:30882400-30883600 Flanking Active TSS NHEK skin
36 chr6:30882600-30883200 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr6:30882600-30883200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
38 chr6:30882600-30883200 Flanking Active TSS Brain Substantia Nigra brain
39 chr6:30882600-30883200 Enhancers Sigmoid Colon Sigmoid Colon
40 chr6:30882600-30883200 Enhancers Small Intestine intestine
41 chr6:30882600-30883400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
42 chr6:30882600-30883400 Flanking Active TSS Rectal Smooth Muscle rectum
43 chr6:30882600-30883400 Flanking Active TSS GM12878-XiMat blood
44 chr6:30882600-30883800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr6:30882600-30884000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr6:30882600-30884000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr6:30882600-30884000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr6:30882600-30884800 Weak transcription Aorta Aorta
49 chr6:30882600-30885000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr6:30882600-30885000 Enhancers Lung lung

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