Variant report

Variant	rs148336348
Chromosome Location	chr1:47859181-47859182
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv945748	chr1:47858512-47862980	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:47847600-47865200	Weak transcription	GM12878-XiMat	blood
2	chr1:47847600-47872800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:47856600-47861400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr1:47858400-47860200	Enhancers	HSMM	muscle
5	chr1:47858600-47859400	Bivalent Enhancer	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr1:47858600-47859400	Enhancers	Muscle Satellite Cultured Cells	--
7	chr1:47858800-47859200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr1:47858800-47859200	Enhancers	HSMMtube	muscle
9	chr1:47859000-47859200	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr1:47859000-47859200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr1:47859000-47859400	Enhancers	Placenta Amnion	Placenta Amnion

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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