Variant report

Variant rs148454395
Chromosome Location chr2:172849351-172849352
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172780600-172854200 Weak transcription Small Intestine intestine
2 chr2:172783600-172851000 Weak transcription Brain Inferior Temporal Lobe brain
3 chr2:172796000-172855200 Weak transcription Gastric stomach
4 chr2:172808000-172849400 Weak transcription Rectal Smooth Muscle rectum
5 chr2:172810000-172862600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr2:172811800-172852200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr2:172811800-172855600 Weak transcription Fetal Heart heart
8 chr2:172813000-172859200 Weak transcription Fetal Brain Male brain
9 chr2:172815400-172850000 Weak transcription HSMMtube muscle
10 chr2:172821000-172862800 Weak transcription Brain Angular Gyrus brain
11 chr2:172823000-172850400 Weak transcription Right Ventricle heart
12 chr2:172823800-172851200 Weak transcription Fetal Kidney kidney
13 chr2:172824000-172857800 Weak transcription Brain Anterior Caudate brain
14 chr2:172824000-172857800 Weak transcription Brain Hippocampus Middle brain
15 chr2:172824200-172850000 Weak transcription NHDF-Ad bronchial
16 chr2:172824200-172850400 Weak transcription HMEC breast
17 chr2:172835800-172850200 Weak transcription H9 Cell Line embryonic stem cell
18 chr2:172836200-172851000 Strong transcription Dnd41 blood
19 chr2:172836400-172851000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr2:172839200-172849800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr2:172840200-172849400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr2:172840800-172857600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr2:172841000-172849400 Strong transcription Primary monocytes fromperipheralblood blood
24 chr2:172841000-172849600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr2:172842400-172849800 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr2:172843400-172852800 Weak transcription Aorta Aorta
27 chr2:172844000-172854000 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr2:172844200-172849800 Weak transcription NHEK skin
29 chr2:172844200-172857200 Weak transcription Brain Germinal Matrix brain
30 chr2:172844400-172857400 Weak transcription Brain Cingulate Gyrus brain
31 chr2:172844600-172849800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr2:172844600-172850200 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr2:172844600-172855600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr2:172845000-172851200 Weak transcription Stomach Smooth Muscle stomach
35 chr2:172845200-172852000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:172845200-172857600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr2:172845400-172849600 Weak transcription Osteobl bone
38 chr2:172845600-172850400 Weak transcription Colonic Mucosa Colon
39 chr2:172845600-172850600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr2:172845600-172850800 Weak transcription Lung lung
41 chr2:172845600-172851000 Weak transcription Fetal Muscle Leg muscle
42 chr2:172845600-172851600 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr2:172845600-172852200 Weak transcription GM12878-XiMat blood
44 chr2:172845600-172854200 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr2:172845600-172854400 Weak transcription Thymus Thymus
46 chr2:172845600-172855600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr2:172845800-172849400 Weak transcription Pancreas Pancrea
48 chr2:172845800-172851400 Weak transcription Spleen Spleen
49 chr2:172846000-172857600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr2:172846200-172850200 Weak transcription A549 lung

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