The 2.0 version of rSNPBase

Variant report

Variant rs148753281
Chromosome Location chr10:18434943-18434944
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:18430600-18446400 Weak transcription Brain Angular Gyrus brain
2 chr10:18430800-18442400 Weak transcription H9 Cell Line embryonic stem cell
3 chr10:18431000-18440600 Weak transcription Fetal Intestine Small intestine
4 chr10:18431200-18437400 Weak transcription Fetal Stomach stomach
5 chr10:18431200-18440600 Weak transcription Aorta Aorta
6 chr10:18431200-18447800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr10:18431200-18447800 Weak transcription Fetal Intestine Large intestine
8 chr10:18431400-18437600 Weak transcription Right Ventricle heart
9 chr10:18431400-18440600 Weak transcription Ovary ovary
10 chr10:18431400-18441200 Enhancers Rectal Smooth Muscle rectum
11 chr10:18431400-18468800 Weak transcription Brain Cingulate Gyrus brain
12 chr10:18432200-18435200 Enhancers Fetal Heart heart
13 chr10:18432400-18440000 Weak transcription Fetal Brain Male brain
14 chr10:18432600-18446800 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr10:18432600-18448000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr10:18433200-18435400 Enhancers Colon Smooth Muscle Colon
17 chr10:18433600-18436000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr10:18433800-18435000 Enhancers Brain Anterior Caudate brain
19 chr10:18433800-18435200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr10:18433800-18435400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr10:18433800-18435400 Enhancers Cortex derived primary cultured neurospheres brain
22 chr10:18433800-18435400 Enhancers Fetal Lung lung
23 chr10:18434200-18444000 Weak transcription Primary hematopoietic stem cells blood
24 chr10:18434200-18448000 Weak transcription Pancreas Pancrea
25 chr10:18434400-18435000 Enhancers HUES6 Cell Line embryonic stem cell
26 chr10:18434400-18435000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr10:18434400-18435200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr10:18434600-18435000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr10:18434600-18435000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr10:18434600-18435000 Enhancers Brain Hippocampus Middle brain
31 chr10:18434600-18435200 Enhancers iPS-18 Cell Line embryonic stem cell
32 chr10:18434800-18435000 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
33 chr10:18434800-18435000 Enhancers iPS-15b Cell Line embryonic stem cell
34 chr10:18434800-18435000 Enhancers iPS-20b Cell Line embryonic stem cell
35 chr10:18434800-18435000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
36 chr10:18434800-18435000 Enhancers Fetal Thymus thymus
37 chr10:18434800-18435000 Flanking Active TSS Stomach Smooth Muscle stomach
38 chr10:18434800-18436000 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr10:18434800-18436000 Enhancers Left Ventricle heart

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Last update: Aug 31, 2015