Variant report

Variant	rs149029592
Chromosome Location	chr10:23699811-23699812
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825305	chr10:23698620-23740919	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	6 gene(s)	inside rSNPs	diseases
2	esv10624	chr10:23699287-23708458	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23689400-23701000	Weak transcription	Osteobl	bone
2	chr10:23693800-23706400	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr10:23693800-23706400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr10:23694000-23701000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr10:23694600-23701400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr10:23694600-23707800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr10:23696000-23700600	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr10:23697000-23706400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr10:23697600-23701000	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr10:23698400-23701200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr10:23699800-23700000	Enhancers	Primary B cells from cord blood	blood
12	chr10:23699800-23700000	Enhancers	Primary T helper naive cells from peripheral blood	blood
13	chr10:23699800-23700000	Bivalent/Poised TSS	Primary T helper memory cells from peripheral blood 1	blood
14	chr10:23699800-23700000	Enhancers	Primary T helper cells fromperipheralblood	blood
15	chr10:23699800-23700000	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
16	chr10:23699800-23700000	Enhancers	Primary T killer memory cells from peripheral blood	blood
17	chr10:23699800-23700000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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