The 2.0 version of rSNPBase

Variant report

Variant rs149046448
Chromosome Location chr3:179418811-179418812
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179372600-179425200 Weak transcription Primary hematopoietic stem cells blood
2 chr3:179384800-179425000 Weak transcription Brain Anterior Caudate brain
3 chr3:179384800-179428400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr3:179384800-179443800 Weak transcription Esophagus oesophagus
5 chr3:179385000-179439200 Weak transcription Brain Cingulate Gyrus brain
6 chr3:179385000-179448400 Weak transcription Fetal Brain Male brain
7 chr3:179385400-179419000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr3:179391000-179444000 Weak transcription Pancreas Pancrea
9 chr3:179391000-179452200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr3:179391400-179426400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr3:179391400-179439200 Weak transcription NHEK skin
12 chr3:179391600-179424000 Weak transcription Hela-S3 cervix
13 chr3:179392600-179425000 Weak transcription Aorta Aorta
14 chr3:179394400-179419400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr3:179397000-179419200 Weak transcription Liver Liver
16 chr3:179397200-179423800 Weak transcription HSMMtube muscle
17 chr3:179397800-179439200 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr3:179398600-179421800 Weak transcription Brain Substantia Nigra brain
19 chr3:179399000-179426400 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr3:179399000-179434000 Weak transcription A549 lung
21 chr3:179399000-179459800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr3:179399200-179425000 Weak transcription Brain Germinal Matrix brain
23 chr3:179399600-179425000 Weak transcription Lung lung
24 chr3:179400000-179421600 Weak transcription Brain Hippocampus Middle brain
25 chr3:179400000-179424000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr3:179400800-179426800 Weak transcription H9 Cell Line embryonic stem cell
27 chr3:179401400-179424200 Weak transcription Right Ventricle heart
28 chr3:179402200-179425000 Weak transcription Thymus Thymus
29 chr3:179402200-179425200 Weak transcription Brain Inferior Temporal Lobe brain
30 chr3:179402600-179425000 Weak transcription Fetal Intestine Large intestine
31 chr3:179402600-179428600 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr3:179402800-179421200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr3:179404000-179421400 Weak transcription Primary B cells from cord blood blood
34 chr3:179404000-179424000 Weak transcription HepG2 liver
35 chr3:179404200-179422600 Weak transcription Stomach Smooth Muscle stomach
36 chr3:179404200-179425000 Weak transcription Placenta Placenta
37 chr3:179404400-179426600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr3:179404800-179426600 Weak transcription GM12878-XiMat blood
39 chr3:179405600-179419000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr3:179405800-179429200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr3:179406000-179425000 Weak transcription Fetal Brain Female brain
42 chr3:179406200-179419200 Weak transcription Primary T cells from cord blood blood
43 chr3:179406200-179503000 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr3:179406600-179449400 Weak transcription Spleen Spleen
45 chr3:179407000-179423800 Weak transcription NHDF-Ad bronchial
46 chr3:179407000-179426400 Weak transcription NHLF lung
47 chr3:179407000-179426600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr3:179407000-179428400 Weak transcription Osteobl bone
49 chr3:179407000-179431200 Weak transcription NH-A brain
50 chr3:179407200-179425000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015