The 2.0 version of rSNPBase

Variant report

Variant rs149092053
Chromosome Location chr18:45344923-45344924
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:45327400-45358400 Weak transcription HSMMtube muscle
2 chr18:45327600-45352600 Weak transcription Fetal Brain Female brain
3 chr18:45328600-45351600 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr18:45332200-45352400 Weak transcription Adipose Nuclei Adipose
5 chr18:45332600-45351800 Weak transcription Fetal Muscle Leg muscle
6 chr18:45332800-45351600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr18:45333000-45357200 Weak transcription Primary hematopoietic stem cells blood
8 chr18:45333200-45345600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr18:45333800-45351600 Weak transcription A549 lung
10 chr18:45334600-45349800 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr18:45335400-45365600 Weak transcription Gastric stomach
12 chr18:45335800-45351600 Weak transcription Fetal Thymus thymus
13 chr18:45336400-45351600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr18:45336600-45351600 Weak transcription Thymus Thymus
15 chr18:45337600-45357200 Weak transcription Dnd41 blood
16 chr18:45339600-45359800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr18:45340200-45351800 Weak transcription Fetal Muscle Trunk muscle
18 chr18:45340400-45369400 Weak transcription Fetal Stomach stomach
19 chr18:45340800-45347800 Weak transcription Hela-S3 cervix
20 chr18:45341000-45364200 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr18:45341400-45351800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr18:45342000-45345400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr18:45342200-45345200 Enhancers iPS-15b Cell Line embryonic stem cell
24 chr18:45342200-45384200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr18:45342400-45353800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr18:45342400-45365400 Weak transcription Psoas Muscle Psoas
27 chr18:45342600-45349200 Weak transcription Primary T cells from cord blood blood
28 chr18:45342600-45351600 Weak transcription Left Ventricle heart
29 chr18:45343200-45351600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr18:45343400-45351800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr18:45343600-45345000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr18:45343600-45345000 Enhancers Cortex derived primary cultured neurospheres brain
33 chr18:45343600-45345000 Enhancers Brain Germinal Matrix brain
34 chr18:45343600-45345400 Enhancers HUES6 Cell Line embryonic stem cell
35 chr18:45343800-45351600 Weak transcription Lung lung
36 chr18:45344000-45361400 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr18:45344000-45373000 Weak transcription Pancreas Pancrea
38 chr18:45344200-45364800 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr18:45344200-45364800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr18:45344400-45345000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr18:45344400-45345400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
42 chr18:45344400-45359800 Weak transcription NHDF-Ad bronchial
43 chr18:45344400-45365400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr18:45344400-45365600 Weak transcription Stomach Smooth Muscle stomach
45 chr18:45344600-45345000 Enhancers Colon Smooth Muscle Colon
46 chr18:45344600-45345200 Flanking Active TSS HUES64 Cell Line embryonic stem cell
47 chr18:45344600-45345200 Enhancers Pancreatic Islets Pancreatic Islet
48 chr18:45344600-45345400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr18:45344600-45351600 Weak transcription Fetal Lung lung
50 chr18:45344600-45358400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015