Variant report

Variant	rs149142840
Chromosome Location	chr3:159277652-159277653
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998949	chr3:158774806-159394550	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
2	esv3692798	chr3:159269142-159302556	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159277000-159278000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr3:159277200-159277800	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr3:159277400-159277800	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
4	chr3:159277400-159277800	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr3:159277400-159278200	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr3:159277400-159278400	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr3:159277600-159277800	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
8	chr3:159277600-159277800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
9	chr3:159277600-159278000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr3:159277600-159278200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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