The 2.0 version of rSNPBase

Variant report

Variant rs149197108
Chromosome Location chr2:172973397-172973398
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172968000-172974800 Weak transcription Gastric stomach
2 chr2:172970600-172973400 Bivalent Enhancer Fetal Muscle Leg muscle
3 chr2:172970600-172973600 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
4 chr2:172971200-172973600 Bivalent Enhancer Primary T cells fromperipheralblood blood
5 chr2:172971400-172973400 Bivalent Enhancer Fetal Muscle Trunk muscle
6 chr2:172971600-172973400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
7 chr2:172971600-172973600 Bivalent Enhancer Primary monocytes fromperipheralblood blood
8 chr2:172971600-172975200 Bivalent Enhancer Fetal Thymus thymus
9 chr2:172971800-172974200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr2:172971800-172974200 Weak transcription NHEK skin
11 chr2:172971800-172974400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr2:172971800-172974600 Weak transcription HMEC breast
13 chr2:172972200-172973400 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
14 chr2:172972200-172973800 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
15 chr2:172972400-172973400 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
16 chr2:172972600-172973400 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr2:172972600-172973400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
18 chr2:172972600-172973400 Bivalent Enhancer Adipose Nuclei Adipose
19 chr2:172972600-172973400 Bivalent Enhancer Liver Liver
20 chr2:172972600-172973400 Bivalent Enhancer Spleen Spleen
21 chr2:172972600-172973800 Bivalent Enhancer iPS DF 6.9 Cell Line embryonic stem cell
22 chr2:172972600-172974200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr2:172972600-172974400 Bivalent Enhancer H1 Cell Line embryonic stem cell
24 chr2:172972600-172974800 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
25 chr2:172972800-172973400 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
26 chr2:172972800-172973400 Bivalent Enhancer Brain Hippocampus Middle brain
27 chr2:172972800-172973400 Bivalent Enhancer Fetal Heart heart
28 chr2:172973000-172973400 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
29 chr2:172973000-172973600 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
30 chr2:172973000-172978200 Weak transcription NHDF-Ad bronchial
31 chr2:172973200-172973400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr2:172973200-172973400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
33 chr2:172973200-172973400 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
34 chr2:172973200-172973600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
35 chr2:172973200-172973600 Bivalent Enhancer Placenta Amnion Placenta Amnion
36 chr2:172973200-172973600 Flanking Bivalent TSS/Enh HepG2 liver
37 chr2:172973200-172973800 Bivalent Enhancer Stomach Smooth Muscle stomach
38 chr2:172973200-172974000 Bivalent Enhancer Primary T cells from cord blood blood
39 chr2:172973200-172974400 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
40 chr2:172973200-172974600 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015