Variant report
| Variant | rs149286879 |
|---|---|
| Chromosome Location | chr12:58238986-58238987 |
| allele | -/GCCCCAGCCTCCGGGGCCAGGTG |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:58235200-58239000 | Flanking Active TSS | Primary T helper cells fromperipheralblood | blood |
| 2 | chr12:58236200-58239000 | Transcr. at gene 5' and 3' | Fetal Stomach | stomach |
| 3 | chr12:58236200-58239400 | Transcr. at gene 5' and 3' | IMR90 fetal lung fibroblasts Cell Line | lung |
| 4 | chr12:58236200-58239400 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 5 | chr12:58236400-58239200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 6 | chr12:58236600-58239200 | Flanking Active TSS | Primary hematopoietic stem cells short term culture | blood |
| 7 | chr12:58237000-58239000 | Flanking Active TSS | Cortex derived primary cultured neurospheres | brain |
| 8 | chr12:58237000-58241000 | Active TSS | Aorta | Aorta |
| 9 | chr12:58237200-58241200 | Active TSS | Ovary | ovary |
| 10 | chr12:58237400-58239000 | Flanking Active TSS | Primary T cells fromperipheralblood | blood |
| 11 | chr12:58237400-58239400 | Flanking Active TSS | Primary neutrophils fromperipheralblood | blood |
| 12 | chr12:58237400-58241200 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 13 | chr12:58237600-58239200 | Flanking Active TSS | Primary T regulatory cells fromperipheralblood | blood |
| 14 | chr12:58237600-58241000 | Active TSS | Rectal Smooth Muscle | rectum |
| 15 | chr12:58237600-58241400 | Active TSS | Brain Substantia Nigra | brain |
| 16 | chr12:58237600-58241400 | Active TSS | Fetal Kidney | kidney |
| 17 | chr12:58237800-58241000 | Active TSS | Duodenum Smooth Muscle | Duodenum |
| 18 | chr12:58237800-58241200 | Active TSS | Colon Smooth Muscle | Colon |
| 19 | chr12:58238000-58239000 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 20 | chr12:58238000-58239400 | Flanking Active TSS | Primary hematopoietic stem cells | blood |
| 21 | chr12:58238000-58239600 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 22 | chr12:58238000-58240200 | Flanking Active TSS | Primary mononuclear cells fromperipheralblood | Blood |
| 23 | chr12:58238000-58241000 | Active TSS | Brain Anterior Caudate | brain |
| 24 | chr12:58238000-58241000 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 25 | chr12:58238000-58241000 | Active TSS | HSMMtube | muscle |
| 26 | chr12:58238000-58241200 | Active TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 27 | chr12:58238200-58239000 | Flanking Active TSS | Primary B cells from peripheral blood | blood |
| 28 | chr12:58238200-58239000 | Flanking Active TSS | HUVEC | blood vessel |
| 29 | chr12:58238200-58239000 | Flanking Active TSS | K562 | blood |
| 30 | chr12:58238200-58239200 | Flanking Active TSS | Primary Natural Killer cells fromperipheralblood | blood |
| 31 | chr12:58238200-58239200 | Flanking Active TSS | Dnd41 | blood |
| 32 | chr12:58238200-58241000 | Active TSS | Brain Inferior Temporal Lobe | brain |
| 33 | chr12:58238400-58240400 | Transcr. at gene 5' and 3' | iPS DF 19.11 Cell Line | embryonic stem cell |
| 34 | chr12:58238400-58240800 | Active TSS | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 35 | chr12:58238400-58240800 | Active TSS | Primary T helper naive cells from peripheral blood | blood |
| 36 | chr12:58238400-58240800 | Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 37 | chr12:58238400-58240800 | Active TSS | Sigmoid Colon | Sigmoid Colon |
| 38 | chr12:58238400-58240800 | Active TSS | Small Intestine | intestine |
| 39 | chr12:58238400-58241000 | Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 40 | chr12:58238400-58241000 | Active TSS | H9 Cell Line | embryonic stem cell |
| 41 | chr12:58238400-58241000 | Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 42 | chr12:58238400-58241000 | Active TSS | Brain Angular Gyrus | brain |
| 43 | chr12:58238400-58241000 | Active TSS | Right Ventricle | heart |
| 44 | chr12:58238400-58241000 | Active TSS | Stomach Smooth Muscle | stomach |
| 45 | chr12:58238400-58241000 | Active TSS | Thymus | Thymus |
| 46 | chr12:58238400-58241000 | Active TSS | NHLF | lung |
| 47 | chr12:58238400-58241000 | Active TSS | Osteobl | bone |
| 48 | chr12:58238400-58241200 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 49 | chr12:58238400-58241200 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 50 | chr12:58238400-58241200 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
