The 2.0 version of rSNPBase

Variant report

Variant rs149725072
Chromosome Location chr6:71567990-71567991
allele -/C
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:71474600-71568800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr6:71506800-71570600 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr6:71531200-71571000 Weak transcription Stomach Mucosa stomach
4 chr6:71537600-71574200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr6:71544400-71568800 Weak transcription HSMMtube muscle
6 chr6:71544400-71569800 Weak transcription Placenta Placenta
7 chr6:71545400-71572200 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr6:71549200-71570000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr6:71549800-71568800 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr6:71549800-71573000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr6:71550000-71575400 Weak transcription Ovary ovary
12 chr6:71550600-71573000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr6:71551000-71571400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr6:71551200-71568600 Weak transcription Brain Cingulate Gyrus brain
15 chr6:71551200-71570200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr6:71551200-71570400 Weak transcription Fetal Brain Female brain
17 chr6:71552400-71574200 Weak transcription HSMM muscle
18 chr6:71554400-71572800 Weak transcription Thymus Thymus
19 chr6:71554400-71572800 Weak transcription Osteobl bone
20 chr6:71554400-71574400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr6:71554600-71572800 Weak transcription Brain Inferior Temporal Lobe brain
22 chr6:71555600-71570200 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr6:71556200-71570400 Weak transcription Stomach Smooth Muscle stomach
24 chr6:71556400-71568600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr6:71556600-71568600 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr6:71556600-71568800 Weak transcription Esophagus oesophagus
27 chr6:71556600-71571400 Weak transcription Psoas Muscle Psoas
28 chr6:71556600-71574400 Weak transcription Fetal Intestine Small intestine
29 chr6:71557000-71572800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr6:71557200-71569600 Weak transcription Fetal Brain Male brain
31 chr6:71557200-71572200 Weak transcription Fetal Heart heart
32 chr6:71557400-71568600 Weak transcription Primary T cells from cord blood blood
33 chr6:71557600-71569800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr6:71557600-71570000 Weak transcription Small Intestine intestine
35 chr6:71557800-71569800 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr6:71558800-71575000 Weak transcription HUVEC blood vessel
37 chr6:71559000-71569800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr6:71559000-71573800 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr6:71559400-71573800 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr6:71560600-71574200 Weak transcription Brain Germinal Matrix brain
41 chr6:71560800-71570000 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr6:71561000-71569800 Weak transcription Fetal Lung lung
43 chr6:71561200-71569800 Weak transcription NHLF lung
44 chr6:71561200-71573000 Weak transcription Brain Anterior Caudate brain
45 chr6:71561200-71573400 Weak transcription HMEC breast
46 chr6:71561600-71574000 Weak transcription H1 Cell Line embryonic stem cell
47 chr6:71562200-71568600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr6:71563400-71573600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr6:71563800-71571600 Weak transcription HepG2 liver
50 chr6:71564000-71570000 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015