Variant report

Variant rs149835480
Chromosome Location chr21:47551108-47551109
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47530800-47563600 Weak transcription Right Atrium heart
2 chr21:47535000-47554800 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr21:47535200-47552000 Strong transcription Breast Myoepithelial Primary Cells Breast
4 chr21:47535200-47552000 Strong transcription NHLF lung
5 chr21:47535200-47552400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr21:47535200-47552800 Strong transcription Fetal Muscle Leg muscle
7 chr21:47538200-47563600 Weak transcription Brain Anterior Caudate brain
8 chr21:47542400-47552000 Weak transcription HSMM muscle
9 chr21:47542600-47551200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr21:47542600-47551400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr21:47542600-47552400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr21:47542800-47552400 Strong transcription NHDF-Ad bronchial
13 chr21:47543600-47553800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr21:47544000-47553400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
15 chr21:47544200-47553800 Strong transcription Osteobl bone
16 chr21:47545000-47556200 Weak transcription HSMMtube muscle
17 chr21:47546200-47556200 Weak transcription Fetal Lung lung
18 chr21:47546400-47551400 Weak transcription Rectal Smooth Muscle rectum
19 chr21:47546400-47552000 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr21:47546800-47552000 Weak transcription Esophagus oesophagus
21 chr21:47547600-47558400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr21:47547800-47555000 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr21:47548000-47557200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr21:47548000-47563600 Weak transcription Gastric stomach
25 chr21:47548200-47555000 Weak transcription H9 Cell Line embryonic stem cell
26 chr21:47548200-47557600 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr21:47548600-47552000 Weak transcription Liver Liver
28 chr21:47548800-47552600 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr21:47548800-47553400 Strong transcription Fetal Stomach stomach
30 chr21:47549200-47553000 Weak transcription NH-A brain
31 chr21:47549200-47556800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr21:47549400-47553000 Weak transcription Colonic Mucosa Colon
33 chr21:47549400-47557000 Weak transcription H1 Cell Line embryonic stem cell
34 chr21:47549400-47557800 Weak transcription Aorta Aorta
35 chr21:47549600-47551400 Weak transcription Fetal Intestine Large intestine
36 chr21:47549600-47552800 Weak transcription Colon Smooth Muscle Colon
37 chr21:47549600-47553000 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr21:47549600-47553800 Weak transcription Adipose Nuclei Adipose
39 chr21:47549600-47555200 Weak transcription Left Ventricle heart
40 chr21:47549800-47563600 Weak transcription Brain Inferior Temporal Lobe brain
41 chr21:47550000-47551400 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr21:47550000-47552000 Weak transcription Ovary ovary
43 chr21:47550000-47552200 Weak transcription Placenta Amnion Placenta Amnion
44 chr21:47550000-47556400 Weak transcription Right Ventricle heart
45 chr21:47550200-47553600 Weak transcription Muscle Satellite Cultured Cells --
46 chr21:47550400-47552000 Genic enhancers Stomach Smooth Muscle stomach
47 chr21:47550600-47551200 Genic enhancers Fetal Muscle Trunk muscle
48 chr21:47550600-47551400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr21:47550600-47554000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr21:47550800-47551200 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin

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