Variant report

Variant	rs149913823
Chromosome Location	chr3:194992683-194992684
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	USF1	chr3:194992406-194992712	GM12878	blood:	n/a	chr3:194992564-194992575
2	NFATC1	chr3:194991959-194992787	GM12878	blood:	n/a	n/a
3	MYC	chr3:194990551-194992950	K562	blood:	n/a	chr3:194992325-194992335 chr3:194992697-194992704
4	TAL1	chr3:194992049-194992860	K562	blood:	n/a	n/a
5	POLR2A	chr3:194991499-194993063	GM12892	blood:	n/a	n/a
6	USF2	chr3:194992381-194992816	Hela-S3	cervix:	n/a	chr3:194992564-194992575 chr3:194992401-194992417
7	RAD21	chr3:194990897-194992865	ECC-1	luminal epithelium:	n/a	chr3:194992398-194992417 chr3:194992401-194992414 chr3:194991015-194991028 chr3:194991258-194991271 chr3:194992399-194992413 chr3:194992403-194992413
8	RAD21	chr3:194992111-194992746	HepG2	liver:	n/a	chr3:194992398-194992417 chr3:194992401-194992414 chr3:194992399-194992413 chr3:194992403-194992413
9	POLR2A	chr3:194991541-194992802	U87	brain:	n/a	n/a
10	KAP1	chr3:194992139-194993110	K562	blood:	n/a	n/a
11	USF1	chr3:194992311-194992775	A549	lung:	n/a	chr3:194992564-194992575 chr3:194992401-194992417
12	POLR2A	chr3:194991258-194993037	GM12878	blood:	n/a	n/a
13	POLR2A	chr3:194991589-194993076	PFSK-1	brain:	n/a	n/a
14	CTCF	chr3:194992139-194992812	K562	blood:	n/a	chr3:194992400-194992409 chr3:194992397-194992415 chr3:194992400-194992413
15	TRIM28	chr3:194992116-194992836	K562	blood:	n/a	n/a
16	JUND	chr3:194990491-194992713	K562	blood:	n/a	n/a
17	MYBL2	chr3:194991770-194992860	HepG2	liver:	n/a	chr3:194992806-194992816
18	USF2	chr3:194992105-194992736	H1-hESC	embryonic stem cell:	n/a	chr3:194992564-194992575 chr3:194992401-194992417
19	CHD1	chr3:194990786-194993337	IMR90	lung:	n/a	n/a
20	POLR2A	chr3:194991594-194992932	SK-N-SH	brain:	n/a	n/a
21	CTCF	chr3:194990662-194992982	A549	lung:	n/a	chr3:194991259-194991272 chr3:194992400-194992409 chr3:194992397-194992415 chr3:194992400-194992413 chr3:194991904-194991917 chr3:194991871-194991884
22	JUND	chr3:194992265-194992859	HepG2	liver:	n/a	n/a
23	POLR2A	chr3:194991001-194992990	K562	blood:	n/a	n/a
24	ATF3	chr3:194992312-194992691	K562	blood:	n/a	n/a
25	MAFK	chr3:194992190-194992718	HepG2	liver:	n/a	n/a
26	FOXA1	chr3:194992212-194992916	HepG2	liver:	n/a	n/a
27	ELK1	chr3:194992206-194992744	K562	blood:	n/a	n/a
28	POLR2A	chr3:194991206-194993038	GM12892	blood:	n/a	n/a
29	CEBPB	chr3:194992030-194992892	GM12878	blood:	n/a	n/a
30	JUN	chr3:194990274-194993159	K562	blood:	n/a	n/a
31	MAX	chr3:194990841-194992949	ECC-1	luminal epithelium:	n/a	chr3:194992325-194992335 chr3:194992697-194992704
32	MAX	chr3:194991163-194992768	A549	lung:	n/a	chr3:194992325-194992335 chr3:194992697-194992704
33	CTCF	chr3:194992152-194992729	K562	blood:	n/a	chr3:194992400-194992409 chr3:194992397-194992415 chr3:194992400-194992413
34	MAX	chr3:194990871-194992910	ECC-1	luminal epithelium:	n/a	chr3:194992325-194992335 chr3:194992697-194992704
35	BHLHE40	chr3:194991314-194992882	K562	blood:	n/a	chr3:194992401-194992417
36	POLR2A	chr3:194991125-194992793	HepG2	liver:	n/a	n/a
37	BHLHE40	chr3:194991377-194992822	HepG2	liver:	n/a	chr3:194992401-194992417
38	CTCF	chr3:194992097-194992753	T-47D	breast:	n/a	chr3:194992400-194992409 chr3:194992397-194992415 chr3:194992400-194992413
39	IRF1	chr3:194991618-194992785	K562	blood:	n/a	chr3:194991891-194991905
40	USF1	chr3:194992380-194992695	HepG2	liver:	n/a	chr3:194992564-194992575 chr3:194992401-194992417
41	EBF1	chr3:194992295-194992765	GM12878	blood:	n/a	chr3:194992465-194992476
42	MYC	chr3:194991027-194992984	Hela-S3	cervix:	n/a	chr3:194992325-194992335 chr3:194992697-194992704
43	RAD21	chr3:194990813-194993039	HCT-116	colon:	n/a	chr3:194992398-194992417 chr3:194992401-194992414 chr3:194991015-194991028 chr3:194991258-194991271 chr3:194992399-194992413 chr3:194992403-194992413
44	POLR2A	chr3:194991219-194993084	HCT-116	colon:	n/a	n/a
45	BCL3	chr3:194991989-194992815	A549	lung:	n/a	chr3:194992411-194992420
46	NFIC	chr3:194991965-194992986	GM12878	blood:	n/a	n/a
47	USF2	chr3:194992383-194992750	K562	blood:	n/a	chr3:194992564-194992575 chr3:194992401-194992417
48	MAX	chr3:194990596-194992818	K562	blood:	n/a	chr3:194992325-194992335 chr3:194992697-194992704
49	POLR2A	chr3:194991776-194993016	HepG2	liver:	n/a	n/a
50	POLR2A	chr3:194992095-194993025	GM12892	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:194992644-194992694	HUVEC	blood vessel:	n/a
2	chr3:194992644-194992694	GM12892	blood:	n/a
3	chr3:194992644-194992694	ovcar-3	ovarian:	n/a
4	chr3:194992644-194992694	GM12878	blood:	n/a
5	chr3:194992644-194992694	CMK	blood:	n/a
6	chr3:194992644-194992694	AG09309	skin:	n/a
7	chr3:194992644-194992694	BJ	skin:	n/a
8	chr3:194992644-194992694	Hepatocyte	liver:	n/a
9	chr3:194992644-194992694	HIPEpiC	eye:	n/a
10	chr3:194992644-194992694	PFSK-1	brain:	n/a
11	chr3:194992644-194992694	HNPCEpiC	eye:	n/a
12	chr3:194992644-194992694	NHBE	bronchial:	n/a
13	chr3:194992644-194992694	PANC-1	pancreas:	n/a
14	chr3:194992644-194992694	SK-N-SH	brain:	n/a
15	chr3:194992644-194992694	AG04449	skin:	fetal
16	chr3:194992644-194992694	HRPEpiC	eye:	n/a
17	chr3:194992644-194992694	SK-N-MC	brain:	n/a
18	chr3:194992644-194992694	AG04450	lung:	fetal
19	chr3:194992644-194992694	HRE	kidney:	n/a
20	chr3:194992644-194992694	HEK293	kidney:	embryo
21	chr3:194992644-194992694	HepG2	liver:	n/a
22	chr3:194992644-194992694	AG09319	gingival:	n/a
23	chr3:194992644-194992694	GM06990	blood:	n/a
24	chr3:194992644-194992694	ProgFib	skin:	n/a
25	chr3:194992644-194992694	K562	blood:	n/a
26	chr3:194992644-194992694	Jurkat	blood:	n/a
27	chr3:194992644-194992694	SK-N-SH_RA	brain:	n/a
28	chr3:194992644-194992694	AG10803	skin:	n/a
29	chr3:194992644-194992694	LNCaP	prostate:	n/a
30	chr3:194992644-194992694	BE2_C	brain:	n/a
31	chr3:194992644-194992694	HAEpiC	amniotic membrane:	n/a
32	chr3:194992644-194992694	NT2-D1	testis:	n/a
33	chr3:194992644-194992694	NH-A	brain:	n/a
34	chr3:194992644-194992694	SKMC	muscle:	n/a
35	chr3:194992644-194992694	H1-hESC	embryonic stem cell:	embryo
36	chr3:194992644-194992694	PrEC	prostate:	n/a
37	chr3:194992644-194992694	GM12891	blood:	n/a
38	chr3:194992644-194992694	Hela-S3	cervix:	n/a
39	chr3:194992644-194992694	HRCEpiC	kidney:	n/a
40	chr3:194992644-194992694	GM19239	blood:	n/a
41	chr3:194992644-194992694	MCF-7	breast:	n/a
42	chr3:194992644-194992694	Caco-2	colon:	n/a
43	chr3:194992644-194992694	HMEC	breast:	n/a
44	chr3:194992644-194992694	T-47D	breast:	n/a
45	chr3:194992644-194992694	HCPEpiC	choroid plexus:	n/a
46	chr3:194992644-194992694	NHDF-neo	bronchial:	n/a
47	chr3:194992644-194992694	HPAEpiC	pulmonary alveolar:	n/a
48	chr3:194992644-194992694	HL-60	blood:	n/a
49	chr3:194992644-194992694	HCF	heart:	n/a
50	chr3:194992644-194992694	AoSMC	blood vessel:	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:194992469..194994554-chr5:42297852..42299758,2	MCF-7	breast:
2	chr3:194990164..194994201-chr3:195268703..195270348,3	K562	blood:
3	chr3:194991144..194993841-chr3:195162528..195164078,2	MCF-7	breast:
4	chr3:194990005..194994037-chr3:194997788..195001012,5	K562	blood:
5	chr3:194990825..194992800-chr3:195162290..195164935,2	K562	blood:
6	chr3:194989967..194994399-chr3:195244037..195248390,6	K562	blood:
7	chr3:194979343..194983092-chr3:194989595..194993137,5	K562	blood:
8	chr3:194990545..194994377-chr3:195246139..195250306,5	K562	blood:
9	chr3:194991198..194994178-chr3:195162096..195163902,2	K562	blood:

Variant related genes	Relation type
XXYLT1	TF binding region
XXYLT1	CpG island
ENSG00000173950	Chromatin interaction
ENSG00000184203	Chromatin interaction
ENSG00000114331	Chromatin interaction
ENSG00000252620	Chromatin interaction

Extended variants
information (count: 42 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:42 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007697	chr3:194554814-195009930	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
2	nsv536873	chr3:194554814-195009930	Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
3	nsv1009796	chr3:194737333-195124248	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
4	nsv1014826	chr3:194834615-195631793	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	73 gene(s)	inside rSNPs	diseases
5	nsv536876	chr3:194834615-195631793	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	73 gene(s)	inside rSNPs	diseases
6	nsv533904	chr3:194868329-195438728	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	65 gene(s)	inside rSNPs	diseases
7	nsv1010168	chr3:194874494-195135790	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
8	nsv536877	chr3:194874494-195135790	Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
9	nsv997956	chr3:194879534-195087539	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
10	nsv536878	chr3:194879534-195087539	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
11	esv1832781	chr3:194902818-195528226	Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	62 gene(s)	inside rSNPs	diseases
12	nsv432508	chr3:194916131-195478861	Strong transcription Enhancers Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	59 gene(s)	inside rSNPs	diseases
13	nsv432510	chr3:194935314-195478861	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	59 gene(s)	inside rSNPs	diseases
14	nsv1005519	chr3:194964301-195340515	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
15	nsv432511	chr3:194986167-195479748	Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
16	esv1818370	chr3:194987569-194995096	Flanking Active TSS Genic enhancers Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
17	esv1818606	chr3:194987569-194995096	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
18	nsv592983	chr3:194987569-194995096	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
19	esv1798889	chr3:194991331-194994754	Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
20	esv1800536	chr3:194991331-194994754	Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
21	esv1809004	chr3:194991331-194994754	Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
22	esv1823800	chr3:194991331-194994754	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
23	esv1835703	chr3:194991331-194994754	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
24	esv1837832	chr3:194991331-194994754	Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
25	esv1849423	chr3:194991331-194994754	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
26	nsv592987	chr3:194991331-194994754	Weak transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
27	esv1793593	chr3:194991331-194995096	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
28	esv1796280	chr3:194991331-194995096	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
29	esv1797183	chr3:194991331-194995096	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
30	esv1799490	chr3:194991331-194995096	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
31	esv1803140	chr3:194991331-194995096	Flanking Active TSS Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
32	esv1803620	chr3:194991331-194995096	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
33	esv1814464	chr3:194991331-194995096	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
34	esv1816728	chr3:194991331-194995096	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
35	esv1834379	chr3:194991331-194995096	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
36	esv1835663	chr3:194991331-194995096	Weak transcription Active TSS Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
37	esv1840756	chr3:194991331-194995096	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
38	esv1840801	chr3:194991331-194995096	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
39	esv1841984	chr3:194991331-194995096	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
40	esv1847389	chr3:194991331-194995096	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
41	nsv592988	chr3:194991331-194995096	Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a
42	nsv592990	chr3:194991382-194995096	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:194990400-194993000	Active TSS	ES-I3 Cell Line	embryonic stem cell
2	chr3:194990600-194992800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
3	chr3:194990600-194993000	Active TSS	HUES64 Cell Line	embryonic stem cell
4	chr3:194990600-194993000	Flanking Active TSS	Primary B cells from cord blood	blood
5	chr3:194990600-194993000	Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr3:194990600-194993200	Active TSS	A549	lung
7	chr3:194990800-194992800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr3:194990800-194992800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr3:194990800-194992800	Active TSS	Ovary	ovary
10	chr3:194990800-194993000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr3:194991000-194992800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr3:194991000-194992800	Active TSS	Esophagus	oesophagus
13	chr3:194991000-194992800	Active TSS	Psoas Muscle	Psoas
14	chr3:194991000-194993000	Active TSS	H1 Cell Line	embryonic stem cell
15	chr3:194991000-194993000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr3:194991000-194993000	Active TSS	HSMMtube	muscle
17	chr3:194991000-194993200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr3:194991000-194993200	Active TSS	iPS-20b Cell Line	embryonic stem cell
19	chr3:194991200-194992800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
20	chr3:194991200-194992800	Active TSS	Left Ventricle	heart
21	chr3:194991200-194992800	Active TSS	Sigmoid Colon	Sigmoid Colon
22	chr3:194991400-194992800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr3:194991400-194992800	Active TSS	Fetal Muscle Trunk	muscle
24	chr3:194991400-194992800	Active TSS	Fetal Muscle Leg	muscle
25	chr3:194991400-194992800	Active TSS	Right Atrium	heart
26	chr3:194991400-194992800	Active TSS	HepG2	liver
27	chr3:194991600-194992800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
28	chr3:194991600-194992800	Active TSS	Right Ventricle	heart
29	chr3:194991800-194992800	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
30	chr3:194992200-194992800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
31	chr3:194992200-194993000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr3:194992200-194993000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr3:194992200-194993000	Flanking Active TSS	Liver	Liver
34	chr3:194992400-194992800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
35	chr3:194992400-194992800	Flanking Active TSS	Primary B cells from peripheral blood	blood
36	chr3:194992400-194992800	Flanking Active TSS	Primary T cells from cord blood	blood
37	chr3:194992400-194992800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
38	chr3:194992400-194992800	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
39	chr3:194992400-194992800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
40	chr3:194992400-194992800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
41	chr3:194992400-194992800	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
42	chr3:194992400-194992800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
43	chr3:194992400-194992800	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
44	chr3:194992400-194992800	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
45	chr3:194992400-194992800	Flanking Active TSS	Adipose Nuclei	Adipose
46	chr3:194992400-194992800	Flanking Active TSS	Brain Angular Gyrus	brain
47	chr3:194992400-194992800	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
48	chr3:194992400-194992800	Flanking Active TSS	Brain Substantia Nigra	brain
49	chr3:194992400-194992800	Flanking Active TSS	Duodenum Mucosa	Duodenum
50	chr3:194992400-194992800	Flanking Active TSS	Fetal Brain Male	brain

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