The 2.0 version of rSNPBase

Variant report

Variant rs149969862
Chromosome Location chr4:125590985-125590986
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:125554000-125591600 Weak transcription Placenta Amnion Placenta Amnion
2 chr4:125554800-125591200 Weak transcription Fetal Kidney kidney
3 chr4:125556800-125591200 Weak transcription Esophagus oesophagus
4 chr4:125562200-125591400 Weak transcription NHLF lung
5 chr4:125569200-125591000 Weak transcription Gastric stomach
6 chr4:125570600-125591000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr4:125571200-125592000 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr4:125571400-125591200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr4:125572800-125591200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr4:125572800-125591200 Weak transcription Fetal Intestine Small intestine
11 chr4:125583400-125591800 Weak transcription Psoas Muscle Psoas
12 chr4:125583400-125595000 Strong transcription HUVEC blood vessel
13 chr4:125584400-125591200 Weak transcription Hela-S3 cervix
14 chr4:125584400-125593600 Strong transcription NHDF-Ad bronchial
15 chr4:125584800-125591800 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr4:125586400-125591000 Weak transcription Brain Angular Gyrus brain
17 chr4:125586400-125591200 Weak transcription Dnd41 blood
18 chr4:125586600-125593800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr4:125586800-125591200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr4:125586800-125594400 Strong transcription HSMM muscle
21 chr4:125587000-125593800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr4:125587000-125595000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr4:125587000-125597200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr4:125587000-125601000 Strong transcription HUES64 Cell Line embryonic stem cell
25 chr4:125587200-125591600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr4:125587200-125594000 Strong transcription Muscle Satellite Cultured Cells --
27 chr4:125587200-125594800 Strong transcription Primary monocytes fromperipheralblood blood
28 chr4:125587200-125594800 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr4:125587400-125594800 Strong transcription iPS-18 Cell Line embryonic stem cell
30 chr4:125587800-125593800 Strong transcription Osteobl bone
31 chr4:125587800-125595200 Strong transcription HUES48 Cell Line embryonic stem cell
32 chr4:125588000-125591000 Weak transcription Brain Substantia Nigra brain
33 chr4:125588000-125591200 Weak transcription Brain Inferior Temporal Lobe brain
34 chr4:125588000-125595000 Strong transcription iPS-20b Cell Line embryonic stem cell
35 chr4:125588200-125591200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr4:125588200-125591400 Weak transcription Fetal Brain Male brain
37 chr4:125588600-125591200 Weak transcription HepG2 liver
38 chr4:125588600-125591600 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr4:125588600-125592000 Weak transcription Brain Cingulate Gyrus brain
40 chr4:125589000-125591200 Weak transcription Spleen Spleen
41 chr4:125589000-125595200 Strong transcription Placenta Placenta
42 chr4:125589200-125591000 Weak transcription Thymus Thymus
43 chr4:125589400-125591000 Weak transcription Pancreas Pancrea
44 chr4:125589600-125591200 Weak transcription Brain Anterior Caudate brain
45 chr4:125589600-125591200 Weak transcription Brain Hippocampus Middle brain
46 chr4:125589600-125591200 Weak transcription K562 blood
47 chr4:125589600-125591400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr4:125589600-125591400 Weak transcription Colonic Mucosa Colon
49 chr4:125589600-125591400 Weak transcription Colon Smooth Muscle Colon
50 chr4:125589600-125593600 Strong transcription H1 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015