The 2.0 version of rSNPBase

Variant report

Variant rs149999192
Chromosome Location chr2:36688220-36688221
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:36660800-36695600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:36668800-36690200 Genic enhancers Breast Myoepithelial Primary Cells Breast
3 chr2:36679200-36688400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr2:36679800-36704000 Weak transcription Fetal Brain Female brain
5 chr2:36680400-36695600 Weak transcription Primary hematopoietic stem cells blood
6 chr2:36682400-36688800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr2:36683400-36691400 Enhancers H1 Cell Line embryonic stem cell
8 chr2:36683800-36690800 Genic enhancers Osteobl bone
9 chr2:36683800-36704000 Weak transcription Pancreas Pancrea
10 chr2:36684000-36695800 Weak transcription Brain Inferior Temporal Lobe brain
11 chr2:36684200-36688400 Weak transcription Primary monocytes fromperipheralblood blood
12 chr2:36684200-36695800 Weak transcription Brain Substantia Nigra brain
13 chr2:36684400-36691800 Enhancers iPS-18 Cell Line embryonic stem cell
14 chr2:36684800-36691800 Weak transcription Fetal Muscle Leg muscle
15 chr2:36684800-36694000 Weak transcription Fetal Brain Male brain
16 chr2:36684800-36695800 Weak transcription Fetal Muscle Trunk muscle
17 chr2:36685000-36691600 Enhancers iPS-15b Cell Line embryonic stem cell
18 chr2:36685200-36689400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
19 chr2:36685600-36690400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
20 chr2:36685800-36689800 Genic enhancers Hela-S3 cervix
21 chr2:36686000-36689200 Genic enhancers HepG2 liver
22 chr2:36686200-36689000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr2:36686400-36689200 Enhancers Adipose Nuclei Adipose
24 chr2:36686400-36689400 Enhancers NHDF-Ad bronchial
25 chr2:36686400-36689800 Genic enhancers HSMM muscle
26 chr2:36686600-36689400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr2:36686600-36689600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr2:36686600-36689600 Enhancers HMEC breast
29 chr2:36686600-36690200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr2:36686600-36690400 Enhancers Rectal Mucosa Donor 31 rectum
31 chr2:36686600-36691200 Enhancers ES-WA7 Cell Line embryonic stem cell
32 chr2:36686600-36691400 Enhancers H9 Cell Line embryonic stem cell
33 chr2:36686800-36688400 Enhancers Colonic Mucosa Colon
34 chr2:36686800-36688600 Enhancers Brain Anterior Caudate brain
35 chr2:36686800-36688600 Enhancers Ovary ovary
36 chr2:36686800-36688800 Enhancers Cortex derived primary cultured neurospheres brain
37 chr2:36686800-36689000 Enhancers Rectal Smooth Muscle rectum
38 chr2:36686800-36689000 Genic enhancers HSMMtube muscle
39 chr2:36686800-36689200 Enhancers Stomach Smooth Muscle stomach
40 chr2:36686800-36689200 Transcr. at gene 5' and 3' A549 lung
41 chr2:36686800-36689800 Enhancers Fetal Intestine Large intestine
42 chr2:36687000-36688400 Enhancers Skeletal Muscle Female skeletal muscle
43 chr2:36687000-36689200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr2:36687000-36689400 Enhancers Fetal Intestine Small intestine
45 chr2:36687000-36690600 Weak transcription Fetal Stomach stomach
46 chr2:36687200-36689000 Weak transcription Fetal Lung lung
47 chr2:36687200-36689400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr2:36687200-36689800 Enhancers Fetal Kidney kidney
49 chr2:36687200-36690200 Weak transcription Left Ventricle heart
50 chr2:36687200-36690600 Weak transcription Esophagus oesophagus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015