Variant report
| Variant | rs1500045 |
|---|---|
| Chromosome Location | chr3:111602056-111602057 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:111584600-111603400 | Weak transcription | Fetal Intestine Large | intestine |
| 2 | chr3:111585200-111622000 | Weak transcription | HSMMtube | muscle |
| 3 | chr3:111585400-111603400 | Weak transcription | Spleen | Spleen |
| 4 | chr3:111585400-111609000 | Weak transcription | Esophagus | oesophagus |
| 5 | chr3:111587200-111603000 | Weak transcription | Placenta | Placenta |
| 6 | chr3:111589200-111603400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 7 | chr3:111589800-111603400 | Weak transcription | Pancreas | Pancrea |
| 8 | chr3:111591600-111603200 | Weak transcription | Ovary | ovary |
| 9 | chr3:111591600-111603600 | Weak transcription | HepG2 | liver |
| 10 | chr3:111591600-111610600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 11 | chr3:111591600-111633200 | Weak transcription | Fetal Kidney | kidney |
| 12 | chr3:111593600-111603000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 13 | chr3:111593600-111603000 | Weak transcription | Lung | lung |
| 14 | chr3:111593600-111603200 | Weak transcription | Gastric | stomach |
| 15 | chr3:111593600-111603400 | Weak transcription | HSMM | muscle |
| 16 | chr3:111593600-111608800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 17 | chr3:111593800-111602800 | Weak transcription | NHLF | lung |
| 18 | chr3:111593800-111603000 | Weak transcription | Fetal Stomach | stomach |
| 19 | chr3:111593800-111603200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 20 | chr3:111593800-111603400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 21 | chr3:111594000-111603400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 22 | chr3:111594400-111603200 | Weak transcription | HMEC | breast |
| 23 | chr3:111595400-111602600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 24 | chr3:111598400-111612600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 25 | chr3:111599200-111603400 | Weak transcription | Right Atrium | heart |
| 26 | chr3:111599400-111603600 | Weak transcription | NH-A | brain |
| 27 | chr3:111599600-111602400 | Weak transcription | Hela-S3 | cervix |
| 28 | chr3:111599600-111603000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 29 | chr3:111599600-111603000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 30 | chr3:111600200-111602800 | Weak transcription | Liver | Liver |
| 31 | chr3:111600200-111603000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 32 | chr3:111600200-111603000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 33 | chr3:111600200-111604000 | Weak transcription | A549 | lung |
| 34 | chr3:111600400-111602600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 35 | chr3:111600400-111603200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 36 | chr3:111600400-111603400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 37 | chr3:111600400-111603600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 38 | chr3:111600600-111603000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 39 | chr3:111600600-111603000 | Weak transcription | Fetal Muscle Leg | muscle |
| 40 | chr3:111600600-111603200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 41 | chr3:111600600-111603200 | Weak transcription | Fetal Intestine Small | intestine |
| 42 | chr3:111600600-111603400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 43 | chr3:111601200-111602400 | Enhancers | Colon Smooth Muscle | Colon |
| 44 | chr3:111601200-111602800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 45 | chr3:111601200-111603200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 46 | chr3:111601200-111612400 | Strong transcription | NHEK | skin |
| 47 | chr3:111601400-111603200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 48 | chr3:111601600-111602400 | Weak transcription | Right Ventricle | heart |
| 49 | chr3:111601600-111602600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 50 | chr3:111601600-111603000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
