Variant report

Variant	rs150066842
Chromosome Location	chr10:49952862-49952863
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895371	chr10:49492075-50232180	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
2	nsv947977	chr10:49951534-49953881	Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:49923400-49960200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
2	chr10:49926400-49953600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr10:49927800-49953400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr10:49928400-49953800	Strong transcription	Primary hematopoietic stem cells	blood
5	chr10:49931000-49956800	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr10:49934400-49955800	Strong transcription	Monocytes-CD14+_RO01746	blood
7	chr10:49934600-49955800	Strong transcription	Primary B cells from cord blood	blood
8	chr10:49939600-49956200	Weak transcription	Adipose Nuclei	Adipose
9	chr10:49948600-49957200	Weak transcription	Esophagus	oesophagus
10	chr10:49951600-49953000	Genic enhancers	GM12878-XiMat	blood
11	chr10:49952000-49953600	Strong transcription	Primary monocytes fromperipheralblood	blood
12	chr10:49952000-49953600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr10:49952000-49953800	Weak transcription	Lung	lung
14	chr10:49952000-49955800	Strong transcription	Primary B cells from peripheral blood	blood
15	chr10:49952000-49956400	Weak transcription	Spleen	Spleen
16	chr10:49952000-49960800	Strong transcription	Primary neutrophils fromperipheralblood	blood
17	chr10:49952800-49955200	Weak transcription	Colonic Mucosa	Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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