Variant report
| Variant | rs150346842 |
|---|---|
| Chromosome Location | chr12:56138825-56138826 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:56136200-56139800 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 2 | chr12:56136400-56140200 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr12:56136600-56139000 | Active TSS | HUES48 Cell Line | embryonic stem cell |
| 4 | chr12:56136600-56139200 | Active TSS | Rectal Smooth Muscle | rectum |
| 5 | chr12:56136600-56139800 | Active TSS | HUES64 Cell Line | embryonic stem cell |
| 6 | chr12:56136600-56140000 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr12:56136600-56140000 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
| 8 | chr12:56136600-56140200 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 9 | chr12:56136600-56140600 | Active TSS | Fetal Kidney | kidney |
| 10 | chr12:56137200-56139200 | Flanking Active TSS | Fetal Muscle Leg | muscle |
| 11 | chr12:56137200-56140000 | Active TSS | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr12:56137400-56139200 | Bivalent Enhancer | Stomach Mucosa | stomach |
| 13 | chr12:56137400-56139400 | Flanking Active TSS | Primary hematopoietic stem cells short term culture | blood |
| 14 | chr12:56137400-56139400 | Flanking Active TSS | Fetal Brain Female | brain |
| 15 | chr12:56137400-56139400 | Flanking Active TSS | Fetal Muscle Trunk | muscle |
| 16 | chr12:56137400-56139800 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 17 | chr12:56137400-56140000 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 18 | chr12:56137600-56139400 | Flanking Active TSS | Primary hematopoietic stem cells | blood |
| 19 | chr12:56137600-56139400 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 20 | chr12:56137600-56139400 | Flanking Active TSS | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 21 | chr12:56137600-56139400 | Flanking Active TSS | Fetal Adrenal Gland | Adrenal Gland |
| 22 | chr12:56137600-56139400 | Flanking Active TSS | Stomach Smooth Muscle | stomach |
| 23 | chr12:56137600-56140400 | Enhancers | Fetal Brain Male | brain |
| 24 | chr12:56137800-56139000 | Flanking Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 25 | chr12:56137800-56139000 | Flanking Active TSS | Primary T helper cells fromperipheralblood | blood |
| 26 | chr12:56137800-56139200 | Flanking Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 27 | chr12:56137800-56139400 | Flanking Active TSS | Cortex derived primary cultured neurospheres | brain |
| 28 | chr12:56137800-56139400 | Flanking Active TSS | Brain Anterior Caudate | brain |
| 29 | chr12:56137800-56139400 | Flanking Active TSS | Brain Cingulate Gyrus | brain |
| 30 | chr12:56137800-56139400 | Flanking Active TSS | Brain Hippocampus Middle | brain |
| 31 | chr12:56137800-56139400 | Flanking Active TSS | Fetal Thymus | thymus |
| 32 | chr12:56137800-56139400 | Flanking Active TSS | Dnd41 | blood |
| 33 | chr12:56137800-56139400 | Flanking Active TSS | GM12878-XiMat | blood |
| 34 | chr12:56137800-56139400 | Flanking Active TSS | K562 | blood |
| 35 | chr12:56137800-56139400 | Flanking Active TSS | NH-A | brain |
| 36 | chr12:56137800-56139400 | Flanking Active TSS | NHLF | lung |
| 37 | chr12:56137800-56140800 | Flanking Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 38 | chr12:56138000-56139000 | Flanking Active TSS | Thymus | Thymus |
| 39 | chr12:56138000-56139400 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 40 | chr12:56138000-56139400 | Flanking Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 41 | chr12:56138000-56139400 | Flanking Active TSS | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 42 | chr12:56138000-56139400 | Enhancers | A549 | lung |
| 43 | chr12:56138000-56140200 | Flanking Active TSS | Brain Germinal Matrix | brain |
| 44 | chr12:56138000-56144800 | Weak transcription | Liver | Liver |
| 45 | chr12:56138000-56144800 | Weak transcription | Lung | lung |
| 46 | chr12:56138000-56145000 | Weak transcription | Gastric | stomach |
| 47 | chr12:56138200-56139000 | Weak transcription | Left Ventricle | heart |
| 48 | chr12:56138200-56139200 | Flanking Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
| 49 | chr12:56138200-56139200 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 50 | chr12:56138200-56139200 | Enhancers | Spleen | Spleen |
