Variant report

Variant	rs1505148
Chromosome Location	chr13:76961804-76961805
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs9565268	0.85[EUR][1000 genomes]
rs9573854	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044736	chr13:76728655-77066435	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv900581	chr13:76956525-77058838	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:76957200-76962000	Enhancers	Fetal Stomach	stomach
2	chr13:76958600-76964400	Weak transcription	Fetal Muscle Leg	muscle
3	chr13:76960600-76962000	Enhancers	Fetal Lung	lung
4	chr13:76961200-76964200	Weak transcription	Rectal Smooth Muscle	rectum
5	chr13:76961400-76962000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr13:76961400-76962000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr13:76961400-76962200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr13:76961400-76962200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr13:76961400-76963000	Weak transcription	Fetal Kidney	kidney
10	chr13:76961600-76962000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr13:76961600-76962400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr13:76961600-76963200	Weak transcription	Stomach Smooth Muscle	stomach
13	chr13:76961800-76962000	Enhancers	HSMM	muscle
14	chr13:76961800-76962000	Enhancers	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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