Variant report

Variant	rs150692952
Chromosome Location	chr2:56700981-56700982
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834093	chr2:56538097-56708677	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1004449	chr2:56538460-56715861	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv874171	chr2:56545845-56727178	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv874172	chr2:56638856-56811749	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	esv2757800	chr2:56659685-56851198	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	esv2759052	chr2:56659685-56851198	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	esv2752438	chr2:56700945-56788111	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:56700400-56701400	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr2:56700400-56701800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
3	chr2:56700400-56702000	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr2:56700400-56702200	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr2:56700400-56702400	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr2:56700600-56701400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
7	chr2:56700600-56701400	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr2:56700600-56701600	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr2:56700600-56702200	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr2:56700600-56703000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr2:56700800-56701200	Enhancers	Muscle Satellite Cultured Cells	--
12	chr2:56700800-56701600	Enhancers	H9 Cell Line	embryonic stem cell
13	chr2:56700800-56703400	Enhancers	Adipose Nuclei	Adipose

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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