Variant report

Variant	rs1507137
Chromosome Location	chr4:60547787-60547788
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11724853	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11733083	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11736631	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1395652	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1848192	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2035428	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2035583	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2128438	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4860757	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6830732	0.90[EUR][1000 genomes]
rs7656483	0.86[ASN][1000 genomes]
rs7677707	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007782	chr4:60385942-60550708	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv2760852	chr4:60424576-60863454	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv594253	chr4:60487235-60549283	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv594254	chr4:60529232-60609054	Enhancers Active TSS Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv980424	chr4:60543627-60561102	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:60543400-60550000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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