Variant report

Variant	rs150774410
Chromosome Location	chr8:126005733-126005734
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891434	chr8:125630655-126324432	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
2	esv3327109	chr8:126005621-126005814	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125986400-126006000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr8:125994400-126009800	Weak transcription	Pancreas	Pancrea
3	chr8:125995200-126008400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:125997400-126009800	Weak transcription	Fetal Lung	lung
5	chr8:125998600-126009400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr8:126000400-126009600	Weak transcription	Fetal Muscle Leg	muscle
7	chr8:126000800-126007600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr8:126002800-126009800	Weak transcription	Fetal Muscle Trunk	muscle
9	chr8:126004200-126007000	Weak transcription	HepG2	liver
10	chr8:126004200-126009600	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr8:126004200-126009800	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr8:126005200-126006000	ZNF genes & repeats	Primary hematopoietic stem cells	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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