Variant report

Variant	rs150781177
Chromosome Location	chr11:8848880-8848881
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:8847441..8849119-chr11:9018204..9019722,2	K562	blood:
2	chr11:8847275..8850671-chr11:8853327..8856938,3	K562	blood:
3	chr11:8701773..8703653-chr11:8846645..8848951,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000166444	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758256	chr11:8784813-9009573	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
2	esv2759803	chr11:8784813-9009573	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
3	nsv527920	chr11:8816695-8856822	Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv435923	chr11:8839325-9000602	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
5	esv3372624	chr11:8848476-8852774	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:79 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8833200-8859800	Weak transcription	Aorta	Aorta
2	chr11:8836400-8849800	Weak transcription	Fetal Intestine Small	intestine
3	chr11:8836600-8850400	Weak transcription	Fetal Lung	lung
4	chr11:8837000-8850000	Weak transcription	Lung	lung
5	chr11:8839000-8849400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr11:8839200-8849600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr11:8845200-8854200	Weak transcription	Psoas Muscle	Psoas
8	chr11:8845800-8860000	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr11:8846600-8854400	Weak transcription	Fetal Intestine Large	intestine
10	chr11:8846800-8849000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr11:8847000-8849200	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr11:8847000-8849400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr11:8847000-8852800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr11:8847200-8849000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
15	chr11:8847200-8849000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
16	chr11:8847200-8849200	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr11:8847200-8849200	Enhancers	NHDF-Ad	bronchial
18	chr11:8847200-8849400	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr11:8847200-8849400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr11:8847200-8849400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr11:8847200-8849800	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr11:8847200-8849800	Enhancers	NHLF	lung
23	chr11:8847400-8849200	Enhancers	Fetal Heart	heart
24	chr11:8847400-8849200	Enhancers	HepG2	liver
25	chr11:8847400-8850400	Enhancers	K562	blood
26	chr11:8847600-8849000	Enhancers	Fetal Muscle Leg	muscle
27	chr11:8847600-8849000	Enhancers	A549	lung
28	chr11:8847600-8849000	Enhancers	HUVEC	blood vessel
29	chr11:8847600-8849200	Enhancers	Placenta Amnion	Placenta Amnion
30	chr11:8847600-8849400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr11:8847600-8849600	Enhancers	Placenta	Placenta
32	chr11:8847600-8850400	Enhancers	Ovary	ovary
33	chr11:8847600-8852600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
34	chr11:8847800-8849000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
35	chr11:8847800-8849000	Enhancers	Stomach Mucosa	stomach
36	chr11:8847800-8849000	Enhancers	Hela-S3	cervix
37	chr11:8847800-8849200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr11:8848000-8849000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
39	chr11:8848000-8849000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr11:8848000-8849000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr11:8848000-8849200	Enhancers	H9 Cell Line	embryonic stem cell
42	chr11:8848000-8849200	Enhancers	NH-A	brain
43	chr11:8848000-8849200	Enhancers	NHEK	skin
44	chr11:8848000-8849400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
45	chr11:8848000-8849600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr11:8848000-8850200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr11:8848000-8850400	Enhancers	H1 Cell Line	embryonic stem cell
48	chr11:8848000-8852800	Enhancers	Fetal Thymus	thymus
49	chr11:8848200-8849000	Enhancers	HUES48 Cell Line	embryonic stem cell
50	chr11:8848200-8849000	Enhancers	Osteobl	bone

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