The 2.0 version of rSNPBase

Variant report

Variant rs150795566
Chromosome Location chr3:179384898-179384899
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179372600-179403200 Weak transcription Primary B cells from cord blood blood
2 chr3:179372600-179408400 Weak transcription Fetal Intestine Small intestine
3 chr3:179372600-179425200 Weak transcription Primary hematopoietic stem cells blood
4 chr3:179374600-179408000 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr3:179375000-179389200 Weak transcription Hela-S3 cervix
6 chr3:179376600-179400800 Weak transcription Dnd41 blood
7 chr3:179379200-179385200 Enhancers Fetal Heart heart
8 chr3:179380600-179418800 Weak transcription Primary T cells fromperipheralblood blood
9 chr3:179382200-179385800 Enhancers Fetal Muscle Leg muscle
10 chr3:179383400-179386600 Enhancers Left Ventricle heart
11 chr3:179383600-179385000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr3:179383600-179385000 Enhancers Brain Substantia Nigra brain
13 chr3:179383800-179385000 Enhancers H1 Cell Line embryonic stem cell
14 chr3:179383800-179385000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr3:179383800-179385000 Enhancers HUES48 Cell Line embryonic stem cell
16 chr3:179383800-179385000 Enhancers HUES64 Cell Line embryonic stem cell
17 chr3:179383800-179385000 Enhancers iPS-18 Cell Line embryonic stem cell
18 chr3:179383800-179385000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
19 chr3:179383800-179385000 Enhancers Brain Hippocampus Middle brain
20 chr3:179383800-179385000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
21 chr3:179383800-179385000 Enhancers Fetal Brain Male brain
22 chr3:179383800-179385000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
23 chr3:179383800-179385000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
24 chr3:179383800-179385200 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr3:179383800-179385400 Enhancers Ovary ovary
26 chr3:179383800-179385400 Enhancers Right Atrium heart
27 chr3:179383800-179385600 Enhancers Fetal Brain Female brain
28 chr3:179383800-179385600 Enhancers Right Ventricle heart
29 chr3:179384000-179385000 Enhancers iPS-20b Cell Line embryonic stem cell
30 chr3:179384000-179385000 Enhancers Adipose Nuclei Adipose
31 chr3:179384000-179385000 Enhancers Brain Cingulate Gyrus brain
32 chr3:179384000-179385000 Enhancers Duodenum Smooth Muscle Duodenum
33 chr3:179384000-179385400 Enhancers Pancreas Pancrea
34 chr3:179384200-179386000 Weak transcription HepG2 liver
35 chr3:179384400-179387800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr3:179384400-179390600 Weak transcription H9 Cell Line embryonic stem cell
37 chr3:179384400-179410400 Weak transcription Rectal Smooth Muscle rectum
38 chr3:179384600-179385000 Enhancers Brain Inferior Temporal Lobe brain
39 chr3:179384600-179385400 Enhancers Cortex derived primary cultured neurospheres brain
40 chr3:179384600-179387800 Weak transcription Lung lung
41 chr3:179384600-179388800 Weak transcription HUVEC blood vessel
42 chr3:179384600-179389000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr3:179384600-179390600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr3:179384600-179397600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr3:179384800-179385000 Active TSS Stomach Smooth Muscle stomach
46 chr3:179384800-179385000 Enhancers HSMMtube muscle
47 chr3:179384800-179385400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
48 chr3:179384800-179386000 Enhancers Brain Germinal Matrix brain
49 chr3:179384800-179387600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr3:179384800-179387600 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015