Variant report

Variant	rs150805361
Chromosome Location	chr11:57144347-57144348
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044030	chr11:57073395-58035564	Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	136 gene(s)	inside rSNPs	diseases
2	nsv541047	chr11:57073395-58035564	Active TSS Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	136 gene(s)	inside rSNPs	diseases
3	nsv530621	chr11:57139699-57703639	Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Weak transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
4	esv3488807	chr11:57142926-57145224	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv12455	chr11:57143327-57146038	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv555102	chr11:57144152-57145940	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:57142800-57144400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr11:57143600-57144600	Weak transcription	A549	lung
3	chr11:57144000-57144400	Active TSS	H9 Cell Line	embryonic stem cell
4	chr11:57144000-57144400	Active TSS	HUES64 Cell Line	embryonic stem cell
5	chr11:57144000-57144400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr11:57144200-57144400	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
7	chr11:57144200-57144400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr11:57144200-57144400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
9	chr11:57144200-57144400	Enhancers	Fetal Muscle Leg	muscle
10	chr11:57144200-57144400	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
11	chr11:57144200-57144600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
12	chr11:57144200-57144800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr11:57144200-57145200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr11:57144200-57146200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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