Variant report

Variant	rs150821634
Chromosome Location	chr14:69140505-69140506
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69133832..69136343-chr14:69137612..69140820,3	K562	blood:
2	chr14:69139896..69142806-chr14:69144430..69145954,2	MCF-7	breast:
3	chr14:69131429..69134144-chr14:69139258..69141880,2	MCF-7	breast:
4	chr14:69125471..69127049-chr14:69139914..69141756,2	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3392590	chr14:69138099-69142797	Weak transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
2	esv3354980	chr14:69140242-69140700	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
3	esv3518705	chr14:69140318-69140782	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv3518707	chr14:69140318-69140782	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
5	esv3330797	chr14:69140367-69140722	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:60 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69129800-69140600	Enhancers	Colon Smooth Muscle	Colon
2	chr14:69131200-69140600	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr14:69132400-69141400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr14:69133600-69141400	Weak transcription	HUVEC	blood vessel
5	chr14:69133800-69141400	Weak transcription	Aorta	Aorta
6	chr14:69136200-69141600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr14:69136200-69145800	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr14:69136600-69141400	Weak transcription	HMEC	breast
9	chr14:69136600-69141600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr14:69136800-69150000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr14:69137200-69141800	Weak transcription	NH-A	brain
12	chr14:69137400-69141600	Weak transcription	Osteobl	bone
13	chr14:69137800-69141400	Weak transcription	HSMM	muscle
14	chr14:69137800-69141800	Weak transcription	Esophagus	oesophagus
15	chr14:69137800-69141800	Weak transcription	HSMMtube	muscle
16	chr14:69137800-69148400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr14:69138000-69141600	Weak transcription	Spleen	Spleen
18	chr14:69138200-69141800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr14:69138200-69144400	Weak transcription	Small Intestine	intestine
20	chr14:69138400-69141400	Weak transcription	Fetal Muscle Trunk	muscle
21	chr14:69138400-69141400	Weak transcription	Placenta	Placenta
22	chr14:69138600-69147800	Weak transcription	Brain Anterior Caudate	brain
23	chr14:69138800-69147200	Weak transcription	Lung	lung
24	chr14:69139200-69141800	Weak transcription	Fetal Thymus	thymus
25	chr14:69139200-69142000	Enhancers	GM12878-XiMat	blood
26	chr14:69139200-69150000	Weak transcription	Thymus	Thymus
27	chr14:69139600-69141400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr14:69139600-69141400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr14:69139600-69141600	Weak transcription	Placenta Amnion	Placenta Amnion
30	chr14:69139800-69141400	Weak transcription	Muscle Satellite Cultured Cells	--
31	chr14:69139800-69141400	Weak transcription	Fetal Intestine Small	intestine
32	chr14:69139800-69142000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr14:69139800-69142800	Weak transcription	Fetal Stomach	stomach
34	chr14:69139800-69143000	Weak transcription	Fetal Muscle Leg	muscle
35	chr14:69139800-69143000	Weak transcription	Skeletal Muscle Male	skeletal muscle
36	chr14:69139800-69143200	Weak transcription	Sigmoid Colon	Sigmoid Colon
37	chr14:69139800-69144200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
38	chr14:69139800-69144400	Weak transcription	Left Ventricle	heart
39	chr14:69139800-69144400	Weak transcription	Right Atrium	heart
40	chr14:69140000-69140800	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr14:69140000-69140800	ZNF genes & repeats	Fetal Lung	lung
42	chr14:69140000-69141000	ZNF genes & repeats	Fetal Brain Male	brain
43	chr14:69140000-69141400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr14:69140000-69141400	Weak transcription	Primary B cells from peripheral blood	blood
45	chr14:69140000-69141400	Weak transcription	Fetal Intestine Large	intestine
46	chr14:69140000-69141800	Weak transcription	Adipose Nuclei	Adipose
47	chr14:69140000-69143800	Weak transcription	Primary B cells from cord blood	blood
48	chr14:69140000-69147200	Weak transcription	Stomach Smooth Muscle	stomach
49	chr14:69140200-69141000	ZNF genes & repeats	Fetal Heart	heart
50	chr14:69140200-69141000	ZNF genes & repeats	Fetal Kidney	kidney

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links