Variant report

Variant	rs151191212
Chromosome Location	chr8:117884354-117884355
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr8:117882604-117887373	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:117777450..117780279-chr8:117883824..117887176,3	MCF-7	breast:
2	chr8:117777051..117780452-chr8:117884154..117888588,6	K562	blood:

Variant related genes	Relation type
RAD21-AS1	TF binding region
ENSG00000147677	Chromatin interaction
ENSG00000147679	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530386	chr8:117509968-118391406	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv831434	chr8:117784467-117977825	Flanking Active TSS Genic enhancers Weak transcription Enhancers Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
3	nsv891407	chr8:117881393-117895239	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
4	nsv891408	chr8:117884270-117895239	Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:117860400-117885800	Weak transcription	Esophagus	oesophagus
2	chr8:117864400-117885800	Weak transcription	Gastric	stomach
3	chr8:117865200-117885800	Weak transcription	Pancreas	Pancrea
4	chr8:117865600-117885800	Weak transcription	Spleen	Spleen
5	chr8:117867000-117885200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr8:117867000-117885600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr8:117870000-117884400	Weak transcription	Colonic Mucosa	Colon
8	chr8:117870200-117884800	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr8:117872600-117884400	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr8:117876000-117884600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
11	chr8:117877400-117885000	Enhancers	Fetal Heart	heart
12	chr8:117877800-117884400	Weak transcription	Fetal Intestine Small	intestine
13	chr8:117877800-117884600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr8:117878200-117884400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr8:117878400-117884600	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr8:117878400-117884800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
17	chr8:117878600-117884800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
18	chr8:117878800-117885800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
19	chr8:117879000-117884400	Enhancers	A549	lung
20	chr8:117879000-117884600	Enhancers	Primary T helper cells fromperipheralblood	blood
21	chr8:117879000-117884600	Weak transcription	Brain Substantia Nigra	brain
22	chr8:117879600-117884600	Enhancers	Primary T helper naive cells from peripheral blood	blood
23	chr8:117879600-117885000	Enhancers	Primary T killer memory cells from peripheral blood	blood
24	chr8:117879800-117884600	Weak transcription	Rectal Mucosa Donor 31	rectum
25	chr8:117880000-117884800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
26	chr8:117880200-117884800	Weak transcription	Brain Angular Gyrus	brain
27	chr8:117880800-117884400	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr8:117881000-117884400	Enhancers	Thymus	Thymus
29	chr8:117881200-117884400	Enhancers	HepG2	liver
30	chr8:117881200-117884600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr8:117881200-117884800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr8:117881200-117887800	Active TSS	GM12878-XiMat	blood
33	chr8:117881400-117884400	Enhancers	HMEC	breast
34	chr8:117881400-117884400	Enhancers	NHDF-Ad	bronchial
35	chr8:117881400-117884400	Enhancers	NHEK	skin
36	chr8:117881600-117884400	Enhancers	Primary hematopoietic stem cells short term culture	blood
37	chr8:117881600-117884800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
38	chr8:117881600-117885200	Enhancers	Colon Smooth Muscle	Colon
39	chr8:117881600-117885200	Enhancers	Small Intestine	intestine
40	chr8:117881800-117884600	Enhancers	HUES48 Cell Line	embryonic stem cell
41	chr8:117881800-117884800	Enhancers	Adipose Nuclei	Adipose
42	chr8:117881800-117884800	Weak transcription	Stomach Smooth Muscle	stomach
43	chr8:117881800-117885600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr8:117881800-117885800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr8:117882200-117884800	Enhancers	Primary hematopoietic stem cells	blood
46	chr8:117882200-117885000	Enhancers	Primary neutrophils fromperipheralblood	blood
47	chr8:117882400-117884400	Enhancers	HUVEC	blood vessel
48	chr8:117882400-117884600	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
49	chr8:117882400-117885200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
50	chr8:117882400-117885600	Enhancers	Primary B cells from peripheral blood	blood

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