Variant report

Variant	rs1520922
Chromosome Location	chr8:64699159-64699160
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10957295	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12674936	0.81[AMR][1000 genomes]
rs12675689	0.82[AMR][1000 genomes]
rs12678656	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12682101	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17217512	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17288060	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2355593	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35972236	0.83[AMR][1000 genomes]
rs7465464	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831344	chr8:64658229-64712338	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64691200-64700800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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