Variant report

Variant	rs1529084
Chromosome Location	chr2:177823384-177823385
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10183398	0.80[ASN][1000 genomes]
rs11892660	0.80[ASN][1000 genomes]
rs13398923	0.80[ASN][1000 genomes]
rs1358293	0.80[ASN][1000 genomes]
rs1358295	0.80[ASN][1000 genomes]
rs73033032	0.80[ASN][1000 genomes]
rs7562648	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875449	chr2:177775612-177835010	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:177820800-177825400	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr2:177820800-177825400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr2:177822800-177827600	Enhancers	Brain Germinal Matrix	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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