The 2.0 version of rSNPBase

Variant report

Variant rs1529424
Chromosome Location chr12:104988650-104988651
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:104971000-104990600 Weak transcription Lung lung
2 chr12:104972200-104989800 Weak transcription Fetal Brain Male brain
3 chr12:104973800-104990800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr12:104974600-104988800 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr12:104974600-104990600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr12:104975000-104988800 Weak transcription Primary monocytes fromperipheralblood blood
7 chr12:104975600-104992000 Weak transcription Gastric stomach
8 chr12:104976800-104996800 Weak transcription Primary T cells from cord blood blood
9 chr12:104978000-104989600 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr12:104978400-104989600 Weak transcription Primary B cells from cord blood blood
11 chr12:104980200-104989200 Weak transcription Fetal Thymus thymus
12 chr12:104980200-104989800 Weak transcription Aorta Aorta
13 chr12:104980200-104997600 Weak transcription Esophagus oesophagus
14 chr12:104980600-104990600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr12:104982400-104989800 Weak transcription Fetal Heart heart
16 chr12:104982600-104994800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr12:104982800-104989200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr12:104982800-104989200 Weak transcription Fetal Stomach stomach
19 chr12:104982800-104989200 Weak transcription HSMM muscle
20 chr12:104982800-104995400 Weak transcription Thymus Thymus
21 chr12:104983000-104988800 Weak transcription GM12878-XiMat blood
22 chr12:104983000-104989200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr12:104983000-104989200 Weak transcription NH-A brain
24 chr12:104983000-104989200 Weak transcription NHLF lung
25 chr12:104983000-104989200 Weak transcription Osteobl bone
26 chr12:104983000-104989400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr12:104983200-104989400 Weak transcription Muscle Satellite Cultured Cells --
28 chr12:104983200-104996800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr12:104983200-104997800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr12:104985000-104989400 Weak transcription Right Atrium heart
31 chr12:104985000-104996400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr12:104985200-104989400 Weak transcription Placenta Placenta
33 chr12:104985400-104988800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr12:104985600-104989000 Weak transcription A549 lung
35 chr12:104985600-104989200 Weak transcription NHDF-Ad bronchial
36 chr12:104985600-104989400 Weak transcription Placenta Amnion Placenta Amnion
37 chr12:104985800-104988800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr12:104986200-104990200 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr12:104986200-104990600 Weak transcription HMEC breast
40 chr12:104986400-104992000 Enhancers K562 blood
41 chr12:104986800-104989200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr12:104986800-104989200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr12:104987000-104989200 Weak transcription NHEK skin
44 chr12:104987000-104989400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr12:104987000-104990800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
46 chr12:104987000-104992400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr12:104987200-104992800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr12:104987400-104989200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr12:104987600-104992600 Weak transcription Spleen Spleen
50 chr12:104987800-104990000 Enhancers Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015