Variant report
| Variant | rs153966 |
|---|---|
| Chromosome Location | chr5:58512214-58512215 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:58474400-58520000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 2 | chr5:58485000-58518800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 3 | chr5:58485600-58512400 | Weak transcription | Pancreas | Pancrea |
| 4 | chr5:58485600-58518200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 5 | chr5:58490400-58519200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 6 | chr5:58491400-58515600 | Weak transcription | Fetal Stomach | stomach |
| 7 | chr5:58494400-58513600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 8 | chr5:58496200-58515600 | Weak transcription | Fetal Kidney | kidney |
| 9 | chr5:58501800-58512400 | Weak transcription | Fetal Brain Male | brain |
| 10 | chr5:58502000-58517200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 11 | chr5:58503200-58514400 | Weak transcription | HUVEC | blood vessel |
| 12 | chr5:58506200-58512600 | Enhancers | Pancreatic Islets | Pancreatic Islet |
| 13 | chr5:58506400-58512400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 14 | chr5:58506400-58518200 | Weak transcription | Left Ventricle | heart |
| 15 | chr5:58506400-58520400 | Weak transcription | Stomach Mucosa | stomach |
| 16 | chr5:58506600-58513200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 17 | chr5:58509200-58518400 | Weak transcription | Brain Hippocampus Middle | brain |
| 18 | chr5:58509400-58518800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 19 | chr5:58509800-58512400 | Weak transcription | Fetal Intestine Small | intestine |
| 20 | chr5:58510000-58515600 | Weak transcription | Psoas Muscle | Psoas |
| 21 | chr5:58510200-58512600 | Strong transcription | Hela-S3 | cervix |
| 22 | chr5:58510200-58512800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 23 | chr5:58510200-58517800 | Weak transcription | Fetal Muscle Leg | muscle |
| 24 | chr5:58510400-58520000 | Weak transcription | Right Ventricle | heart |
| 25 | chr5:58510800-58515600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 26 | chr5:58511000-58513400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 27 | chr5:58511000-58515400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 28 | chr5:58511000-58515800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 29 | chr5:58511400-58515600 | Weak transcription | Fetal Heart | heart |
| 30 | chr5:58511800-58512400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 31 | chr5:58511800-58513400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 32 | chr5:58511800-58521600 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 33 | chr5:58512000-58512600 | Enhancers | A549 | lung |
| 34 | chr5:58512000-58512800 | Enhancers | Fetal Lung | lung |
| 35 | chr5:58512000-58516200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 36 | chr5:58512200-58512400 | Enhancers | Duodenum Mucosa | Duodenum |
| 37 | chr5:58512200-58512800 | Enhancers | Gastric | stomach |
| 38 | chr5:58512200-58514000 | Enhancers | Colon Smooth Muscle | Colon |
| 39 | chr5:58512200-58514000 | Enhancers | Fetal Intestine Large | intestine |
