Variant report

Variant	rs1547011
Chromosome Location	chr14:69135467-69135468
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:14)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:69134802..69136420-chr14:69275225..69277429,2	MCF-7	breast:
2	chr14:69134420..69136018-chr14:69260973..69262478,2	MCF-7	breast:
3	chr14:69135342..69138220-chr14:69251812..69254246,3	MCF-7	breast:
4	chr14:69135401..69138054-chr14:69145098..69147718,2	K562	blood:
5	chr14:69135163..69138433-chr14:69253381..69256007,3	MCF-7	breast:
6	chr14:69134535..69137346-chr14:69145752..69148446,2	MCF-7	breast:
7	chr14:69134295..69136802-chr14:69251321..69253265,2	MCF-7	breast:
8	chr14:69109174..69112186-chr14:69134021..69137562,3	MCF-7	breast:
9	chr14:69134172..69139010-chr14:69141375..69149578,10	MCF-7	breast:
10	chr14:69133832..69136343-chr14:69137612..69140820,3	K562	blood:
11	chr14:68717220..68719898-chr14:69134172..69135890,2	MCF-7	breast:
12	chr14:69094527..69096437-chr14:69133995..69136372,2	MCF-7	breast:
13	chr14:69123995..69127271-chr14:69134503..69138047,3	MCF-7	breast:
14	chr14:69135213..69137998-chr14:69141394..69143507,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000259038	Chromatin interaction
ENSG00000185650	Chromatin interaction

rs_ID	r²[population]
rs12437314	0.81[JPT][hapmap]
rs4902628	0.96[CEU][hapmap];0.95[TSI][hapmap];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]

Chromatin state (count:75 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69120800-69139800	Enhancers	Fetal Muscle Leg	muscle
2	chr14:69122000-69136000	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr14:69123000-69137800	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr14:69126600-69136000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:69128400-69137800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr14:69128600-69136400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr14:69129000-69140200	Enhancers	NHDF-Ad	bronchial
8	chr14:69129200-69137600	Enhancers	NHLF	lung
9	chr14:69129200-69140000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr14:69129800-69140600	Enhancers	Colon Smooth Muscle	Colon
11	chr14:69130200-69135800	Enhancers	Skeletal Muscle Male	skeletal muscle
12	chr14:69130400-69139600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr14:69130600-69135600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr14:69130600-69136000	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr14:69130600-69137800	Enhancers	HSMMtube	muscle
16	chr14:69130600-69140000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr14:69130600-69140000	Enhancers	Rectal Smooth Muscle	rectum
18	chr14:69131000-69137600	Enhancers	Fetal Lung	lung
19	chr14:69131200-69138000	Enhancers	Placenta Amnion	Placenta Amnion
20	chr14:69131200-69138400	Enhancers	Placenta	Placenta
21	chr14:69131200-69139800	Enhancers	Fetal Stomach	stomach
22	chr14:69131200-69140600	Enhancers	Skeletal Muscle Female	skeletal muscle
23	chr14:69131600-69135800	Weak transcription	Brain Anterior Caudate	brain
24	chr14:69131600-69136000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
25	chr14:69131800-69135600	Weak transcription	Brain Hippocampus Middle	brain
26	chr14:69132400-69136600	Enhancers	Fetal Thymus	thymus
27	chr14:69132400-69141400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr14:69132800-69136000	Weak transcription	Left Ventricle	heart
29	chr14:69132800-69136000	Weak transcription	Right Ventricle	heart
30	chr14:69132800-69136400	Weak transcription	Brain Cingulate Gyrus	brain
31	chr14:69132800-69136400	Weak transcription	Colonic Mucosa	Colon
32	chr14:69133000-69135600	Weak transcription	Fetal Kidney	kidney
33	chr14:69133200-69136000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr14:69133400-69136000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr14:69133400-69138000	Enhancers	Stomach Mucosa	stomach
36	chr14:69133400-69140000	Weak transcription	Primary T cells from cord blood	blood
37	chr14:69133600-69138800	Enhancers	Lung	lung
38	chr14:69133600-69140400	Enhancers	Pancreas	Pancrea
39	chr14:69133600-69141400	Weak transcription	HUVEC	blood vessel
40	chr14:69133800-69135600	Strong transcription	Primary B cells from cord blood	blood
41	chr14:69133800-69140000	Weak transcription	Fetal Brain Male	brain
42	chr14:69133800-69141400	Weak transcription	Aorta	Aorta
43	chr14:69134000-69136400	Weak transcription	Duodenum Mucosa	Duodenum
44	chr14:69134000-69136600	Weak transcription	Psoas Muscle	Psoas
45	chr14:69134000-69139200	Weak transcription	GM12878-XiMat	blood
46	chr14:69134400-69135800	Weak transcription	Rectal Mucosa Donor 31	rectum
47	chr14:69134400-69136200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
48	chr14:69134400-69136800	Weak transcription	Osteobl	bone
49	chr14:69134400-69139800	Enhancers	Right Atrium	heart
50	chr14:69134600-69135800	Weak transcription	HepG2	liver

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