The 2.0 version of rSNPBase

Variant report

Variant rs1548013
Chromosome Location chr3:158431070-158431071
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:158390800-158432800 Weak transcription Spleen Spleen
2 chr3:158390800-158444200 Weak transcription Gastric stomach
3 chr3:158390800-158445400 Weak transcription H1 Cell Line embryonic stem cell
4 chr3:158391000-158438800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr3:158397000-158443400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr3:158397000-158448000 Weak transcription Thymus Thymus
7 chr3:158399600-158445400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr3:158403600-158438600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr3:158408400-158443000 Weak transcription HepG2 liver
10 chr3:158409800-158439000 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr3:158411600-158439400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr3:158412200-158440800 Weak transcription Rectal Smooth Muscle rectum
13 chr3:158412400-158439200 Weak transcription Fetal Kidney kidney
14 chr3:158415000-158440800 Weak transcription Colonic Mucosa Colon
15 chr3:158417600-158440600 Weak transcription Aorta Aorta
16 chr3:158421600-158431200 Strong transcription Primary T cells from cord blood blood
17 chr3:158421800-158435600 Strong transcription Fetal Intestine Small intestine
18 chr3:158423200-158431800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr3:158423800-158438800 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr3:158424200-158446000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr3:158425200-158431400 Strong transcription Dnd41 blood
22 chr3:158426400-158432400 Strong transcription Fetal Intestine Large intestine
23 chr3:158426400-158435200 Weak transcription Fetal Brain Male brain
24 chr3:158426600-158431400 Enhancers NHDF-Ad bronchial
25 chr3:158426600-158432400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr3:158426600-158436600 Strong transcription Fetal Stomach stomach
27 chr3:158426800-158431200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr3:158426800-158432000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr3:158426800-158432200 Enhancers NHLF lung
30 chr3:158427000-158431400 Genic enhancers A549 lung
31 chr3:158427200-158431400 Genic enhancers K562 blood
32 chr3:158427200-158431400 Enhancers Osteobl bone
33 chr3:158427200-158432000 Strong transcription Fetal Muscle Leg muscle
34 chr3:158427200-158435600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr3:158427600-158431800 Weak transcription Lung lung
36 chr3:158427600-158439000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr3:158427600-158440600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr3:158427800-158440400 Weak transcription Primary monocytes fromperipheralblood blood
39 chr3:158427800-158440600 Weak transcription Duodenum Mucosa Duodenum
40 chr3:158427800-158440800 Weak transcription Liver Liver
41 chr3:158427800-158440800 Weak transcription Esophagus oesophagus
42 chr3:158428000-158432200 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr3:158428000-158434800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr3:158428000-158438800 Weak transcription Fetal Brain Female brain
45 chr3:158428600-158431400 Genic enhancers Breast Myoepithelial Primary Cells Breast
46 chr3:158428600-158431400 Strong transcription Primary T regulatory cells fromperipheralblood blood
47 chr3:158428600-158438800 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr3:158429000-158440600 Weak transcription Primary B cells from peripheral blood blood
49 chr3:158429200-158431200 Weak transcription Primary B cells from cord blood blood
50 chr3:158429200-158432000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015