Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1548287	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17119197	0.81[ASN][1000 genomes]
rs17119204	0.85[ASN][1000 genomes]
rs17119208	0.81[ASN][1000 genomes]
rs17119232	0.82[ASN][1000 genomes]
rs17119233	0.82[ASN][1000 genomes]
rs17119260	0.86[ASN][1000 genomes]
rs17712804	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61329967	0.81[ASN][1000 genomes]
rs6574759	0.88[ASN][1000 genomes]
rs6574762	0.87[ASN][1000 genomes]
rs7143832	0.88[ASN][1000 genomes]
rs7145366	0.88[ASN][1000 genomes]
rs7157535	0.81[ASN][1000 genomes]
rs7157949	0.87[ASN][1000 genomes]
rs7160580	0.88[ASN][1000 genomes]
rs8018846	0.88[ASN][1000 genomes]
rs928225	0.89[ASN][1000 genomes]
rs928226	0.89[ASN][1000 genomes]
rs951131	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431019	chr14:84303525-84365447	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv902159	chr14:84336944-84447356	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84342800-84351400	Weak transcription	Ovary	ovary

Quick Search: