Variant report

Variant rs1551889
Chromosome Location chr11:67273835-67273836
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:67270600-67276600 Enhancers Fetal Heart heart
2 chr11:67271000-67276800 Active TSS Pancreatic Islets Pancreatic Islet
3 chr11:67271200-67275400 Flanking Active TSS Pancreas Pancrea
4 chr11:67271200-67275600 Flanking Active TSS Colonic Mucosa Colon
5 chr11:67272200-67274000 Active TSS Right Ventricle heart
6 chr11:67272600-67274800 Weak transcription Fetal Kidney kidney
7 chr11:67272600-67276400 Enhancers Fetal Brain Male brain
8 chr11:67272800-67274000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr11:67272800-67274000 Flanking Active TSS Primary T cells fromperipheralblood blood
10 chr11:67272800-67274000 Flanking Active TSS Brain Cingulate Gyrus brain
11 chr11:67272800-67274000 Flanking Active TSS Brain Inferior Temporal Lobe brain
12 chr11:67272800-67274200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
13 chr11:67272800-67274200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
14 chr11:67272800-67274400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr11:67272800-67274800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr11:67272800-67274800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr11:67272800-67274800 Enhancers Spleen Spleen
18 chr11:67272800-67275000 Weak transcription Small Intestine intestine
19 chr11:67272800-67275200 Weak transcription Ovary ovary
20 chr11:67273000-67274000 Flanking Active TSS Primary T cells from cord blood blood
21 chr11:67273000-67274000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
22 chr11:67273000-67274000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
23 chr11:67273000-67274000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
24 chr11:67273000-67274000 Flanking Active TSS Brain Angular Gyrus brain
25 chr11:67273000-67274000 Flanking Active TSS Brain Anterior Caudate brain
26 chr11:67273000-67274000 Flanking Active TSS Brain Hippocampus Middle brain
27 chr11:67273000-67274000 Flanking Active TSS Duodenum Mucosa Duodenum
28 chr11:67273000-67274000 Flanking Active TSS Thymus Thymus
29 chr11:67273000-67274000 Flanking Active TSS HSMMtube muscle
30 chr11:67273000-67274000 Flanking Active TSS NHEK skin
31 chr11:67273000-67274200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
32 chr11:67273000-67274200 Flanking Active TSS Duodenum Smooth Muscle Duodenum
33 chr11:67273000-67274200 Flanking Active TSS Fetal Intestine Large intestine
34 chr11:67273000-67274200 Flanking Active TSS Stomach Smooth Muscle stomach
35 chr11:67273000-67274600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
36 chr11:67273000-67274800 Enhancers H1 Cell Line embryonic stem cell
37 chr11:67273000-67274800 Weak transcription H9 Cell Line embryonic stem cell
38 chr11:67273000-67275000 Flanking Active TSS GM12878-XiMat blood
39 chr11:67273000-67275000 Flanking Active TSS HepG2 liver
40 chr11:67273000-67275400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
41 chr11:67273000-67275400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
42 chr11:67273200-67274000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr11:67273200-67274000 Flanking Active TSS Rectal Smooth Muscle rectum
44 chr11:67273200-67274600 Weak transcription Fetal Brain Female brain
45 chr11:67273200-67274800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
46 chr11:67273200-67275000 Enhancers Primary hematopoietic stem cells blood
47 chr11:67273200-67275000 Enhancers Fetal Muscle Trunk muscle
48 chr11:67273400-67274000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr11:67273400-67274000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr11:67273400-67274000 Weak transcription Gastric stomach

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