Variant report

Variant rs1553609
Chromosome Location chr7:66197139-66197140
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:66149000-66199600 Weak transcription Thymus Thymus
2 chr7:66165400-66204600 Weak transcription Rectal Smooth Muscle rectum
3 chr7:66176400-66204600 Weak transcription Colonic Mucosa Colon
4 chr7:66178600-66200400 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr7:66179000-66197200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr7:66179200-66200600 Weak transcription Duodenum Mucosa Duodenum
7 chr7:66179400-66199800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr7:66179600-66204600 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr7:66181600-66202000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr7:66182600-66199800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr7:66182800-66205000 Weak transcription Gastric stomach
12 chr7:66185400-66197600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr7:66188400-66201800 Weak transcription Fetal Brain Male brain
14 chr7:66190000-66200400 Weak transcription HepG2 liver
15 chr7:66190000-66201200 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr7:66190200-66198800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr7:66190400-66197600 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr7:66190400-66204600 Weak transcription Stomach Mucosa stomach
19 chr7:66190600-66200200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr7:66190600-66201200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr7:66190800-66200200 Weak transcription Brain Anterior Caudate brain
22 chr7:66190800-66200400 Weak transcription Primary hematopoietic stem cells blood
23 chr7:66190800-66200600 Weak transcription HSMM muscle
24 chr7:66190800-66204400 Weak transcription Fetal Heart heart
25 chr7:66190800-66204600 Weak transcription NHEK skin
26 chr7:66191000-66197200 Weak transcription GM12878-XiMat blood
27 chr7:66191000-66197200 Weak transcription HSMMtube muscle
28 chr7:66191000-66199600 Weak transcription Osteobl bone
29 chr7:66191000-66199800 Weak transcription Liver Liver
30 chr7:66191000-66200400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr7:66191000-66200600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr7:66191000-66200600 Weak transcription Brain Angular Gyrus brain
33 chr7:66191200-66199800 Weak transcription Left Ventricle heart
34 chr7:66191200-66199800 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr7:66191200-66200200 Weak transcription Primary B cells from cord blood blood
36 chr7:66191200-66200400 Weak transcription Aorta Aorta
37 chr7:66191200-66200400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr7:66191200-66200400 Weak transcription Dnd41 blood
39 chr7:66191200-66204600 Weak transcription NHLF lung
40 chr7:66191200-66205000 Weak transcription Placenta Amnion Placenta Amnion
41 chr7:66191400-66197200 Weak transcription Placenta Placenta
42 chr7:66191400-66200200 Weak transcription Primary neutrophils fromperipheralblood blood
43 chr7:66191400-66200200 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr7:66191400-66200600 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr7:66191400-66204600 Weak transcription Primary T cells from cord blood blood
46 chr7:66191600-66199800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr7:66191600-66204600 Weak transcription NHDF-Ad bronchial
48 chr7:66191800-66204800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr7:66192600-66200200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr7:66193800-66197800 Weak transcription H1 Cell Line embryonic stem cell

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