Variant report

Variant rs1554877
Chromosome Location chr2:64418977-64418978
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:64413400-64421600 Enhancers Primary monocytes fromperipheralblood blood
2 chr2:64414000-64419400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:64414200-64419000 Enhancers Primary neutrophils fromperipheralblood blood
4 chr2:64414200-64419400 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr2:64414200-64421200 Weak transcription Placenta Placenta
6 chr2:64414400-64419000 Weak transcription Fetal Muscle Leg muscle
7 chr2:64414400-64419400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr2:64415000-64419400 Weak transcription Liver Liver
9 chr2:64415000-64428200 Weak transcription Fetal Lung lung
10 chr2:64415200-64419200 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr2:64415200-64419400 Weak transcription H9 Cell Line embryonic stem cell
12 chr2:64415200-64419400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr2:64415200-64419400 Weak transcription Colon Smooth Muscle Colon
14 chr2:64415200-64419600 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr2:64415400-64419200 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr2:64415400-64431000 Weak transcription Lung lung
17 chr2:64416200-64419400 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr2:64416400-64419200 Enhancers GM12878-XiMat blood
19 chr2:64416600-64419400 Weak transcription Ovary ovary
20 chr2:64416600-64419600 Weak transcription Small Intestine intestine
21 chr2:64416600-64420200 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr2:64416600-64424000 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr2:64416800-64419400 Weak transcription H1 Cell Line embryonic stem cell
24 chr2:64416800-64419400 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr2:64416800-64420600 Weak transcription Left Ventricle heart
26 chr2:64416800-64423600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr2:64416800-64438000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr2:64417000-64419200 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr2:64417400-64421200 Enhancers Primary B cells from peripheral blood blood
30 chr2:64417800-64419200 Weak transcription Brain Anterior Caudate brain
31 chr2:64417800-64419600 Weak transcription Duodenum Mucosa Duodenum
32 chr2:64417800-64431000 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr2:64418200-64419200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr2:64418200-64419400 Enhancers Primary B cells from cord blood blood
35 chr2:64418200-64419400 Weak transcription Adipose Nuclei Adipose
36 chr2:64418200-64419600 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr2:64418200-64424000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr2:64418200-64424000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr2:64418200-64424000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr2:64418200-64426400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr2:64418200-64430800 Weak transcription Right Atrium heart
42 chr2:64418400-64419400 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr2:64418400-64428200 Weak transcription Stomach Mucosa stomach
44 chr2:64418600-64419000 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr2:64418600-64424200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr2:64418800-64419600 Enhancers Primary T helper cells PMA-I stimulated --
47 chr2:64418800-64420000 Enhancers Spleen Spleen
48 chr2:64418800-64421200 Flanking Active TSS Monocytes-CD14+_RO01746 blood

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